RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 UBAP1LF5GYI3 381 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 TNNI2P48788 182 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 ZNF274Q96GC6 653 aaPredicted RBP13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 ZHX1Q9UKY1 873 aaPredicted RBP13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 KCNQ3O43525 872 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 ME3Q16798 604 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 EYA3Q99504 573 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 E7EWF7 191 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 KRT13P13646 458 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 UBXN1Q04323 297 aa13.41□□□□□ -0.26
DEPDC1-201ENST00000370966 GOLGA6L10A0A0M3HER8 536 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 ZAP70P43403 619 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 CBX8Q9HC52 389 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 CCDC87Q9NVE4 849 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 SCLT1Q96NL6 688 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 BAG1Q99933 345 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 ZNF202O95125 648 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 PRPHP41219 470 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 KRT40Q6A162 431 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 SELENOOQ9BVL4 669 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 GOPCQ9HD26 462 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 AKR1B15C9JRZ8 316 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 HS2ST1Q7LGA3 356 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 PALD1Q9ULE6 856 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
DEPDC1-201ENST00000370966 JAK2O60674 1132 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 ZNF75DP51815 510 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 ZNF174Q15697 407 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 HOOK3Q86VS8 718 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 SPATA5Q8NB90 893 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 SMC1AQ14683 1233 aaKnown RBP13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 KIAA0753Q2KHM9 967 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 HAUS7Q99871 368 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 GNPATO15228 680 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 TERF1P54274 439 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 TRIM14Q14142 442 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 NEK11Q8NG66 645 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 RGS12O14924 1447 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 A0A0D9SFI3 127 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 PTH1RQ03431 593 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 USP6P35125 1406 aa13.39□□□□□ -0.27
DEPDC1-201ENST00000370966 LMAN1P49257 510 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 GLT8D2Q9H1C3 349 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 MTMR6Q9Y217 621 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 HSF2BPO75031 334 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 WDHD1O75717 1129 aaPredicted RBP13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 FANCCQ00597 558 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 WDR78Q5VTH9 848 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 EDC3Q96F86 508 aaKnown RBP13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 BCCIPQ9P287 314 aaKnown RBP eCLIP13.38□□□□□ -0.27
DEPDC1-201ENST00000370966 CTNNA2P26232 953 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 NLRP12P59046 1061 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 MCM6Q14566 821 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 SV2BQ7L1I2 683 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 TRMT1LQ7Z2T5 733 aaKnown RBP13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 FERMT2Q96AC1 680 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 SLAIN2Q9P270 581 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 KIF1BO60333 1816 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 MYSM1Q5VVJ2 828 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 LZTFL1Q9NQ48 299 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 LIG1P18858 919 aa13.37□□□□□ -0.27
DEPDC1-201ENST00000370966 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms