RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 NAALADL2Q58DX5 795 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 C6orf118Q5T5N4 469 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 KDF1Q8NAX2 398 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 STK32AQ8WU08 396 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 DCAF5Q96JK2 942 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 CAPNS2Q96L46 248 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 GPR101Q96P66 508 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 ESYT1Q9BSJ8 1104 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 ZNF395Q9H8N7 513 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 POLMQ9NP87 494 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 TMA7Q9Y2S6 64 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 BCL9O00512 1426 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 SPATA31E1Q6ZUB1 1445 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 ERBINQ96RT1 1412 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 ALS2Q96Q42 1657 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 LAMA3Q16787 3333 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 GTF2E1P29083 439 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 GPC1P35052 558 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 KRT76Q01546 638 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 TLR1Q15399 786 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 SWI5Q1ZZU3 235 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 LONRF3Q496Y0 759 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 TMEM164Q5U3C3 297 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 B4GALNT3Q6L9W6 998 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 ZNF662Q6ZS27 426 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 NME8Q8N427 588 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 SERTAD1Q9UHV2 236 aa4.58□□□□□ -1.68
ECHDC1-205ENST00000368295 BTAF1O14981 1849 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 SLURP2P0DP57 97 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 DPH6Q7L8W6 267 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 CNKSR1Q969H4 720 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 SLC4A9Q96Q91 983 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 PURBQ96QR8 312 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 COL5A2P05997 1499 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 KIAA1551Q9HCM1 1747 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 UNC79Q9P2D8 2635 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 NHSQ6T4R5 1651 aa4.57□□□□□ -1.68
ECHDC1-205ENST00000368295 SOX1O00570 391 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 STAU1O95793 577 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 RNF144AP50876 292 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 SMTNP53814 917 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 IGBP1P78318 339 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 INSM2Q96T92 566 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 BCL2L13Q9BXK5 485 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 HRH3Q9Y5N1 445 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 CRB1P82279 1406 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 AKAP12Q02952 1782 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 ARID4AP29374 1257 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 CENPCQ03188 943 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 MTFR1Q15390 333 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 HSP90AB2PQ58FF8 381 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 GNASQ5JWF2 1037 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 SLC27A3Q5K4L6 730 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 DNAJC14Q6Y2X3 702 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 TOM1L2Q6ZVM7 507 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 TSEN2Q8NCE0 465 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 CLP1Q92989 425 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 ZSCAN10Q96SZ4 725 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 ZIC5Q96T25 663 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 QRICH2Q9H0J4 1663 aa4.56□□□□□ -1.68
ECHDC1-205ENST00000368295 MUC3AQ02505 3323 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 A6NJY4 79 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 SOBPA7XYQ1 873 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 ITGB2P05107 769 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 OS9Q13438 667 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 SAFB2Q14151 953 aaKnown RBP eCLIP4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 HINFPQ9BQA5 517 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 LMO7Q8WWI1 1683 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 THSD7BQ9C0I4 1608 aa4.55□□□□□ -1.68
ECHDC1-205ENST00000368295 hCG_2014768A0A024R1R8 64 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 TTLL8A6PVC2 850 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 H0YGN5 161 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CDK2AP1O14519 115 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CREB3O43889 395 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 KCNA3P22001 575 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CTSOP43234 321 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 EPHA4P54764 986 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 FOXD4L6Q3SYB3 417 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CIAPIN1Q6FI81 312 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 TMEM214Q6NUQ4 689 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 FOXD4L3Q6VB84 417 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 GAS2L2Q8NHY3 880 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 RNF217Q8TC41 542 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 GRIP2Q9C0E4 1043 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CUEDC1Q9NWM3 386 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 SCHIP1Q9P0W5 487 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CHMP3Q9Y3E7 222 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 SBNO2Q9Y2G9 1366 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 CCDC194A0A1B0GVG4 234 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 TLDC2A0PJX2 215 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 PEX14O75381 377 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 MAP4K4O95819 1239 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 IBSPP21815 317 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 IGFBP4P22692 258 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 MAP1SQ66K74 1059 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 FAM43BQ6ZT52 329 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 Q7L0L9 218 aa4.54□□□□□ -1.68
ECHDC1-205ENST00000368295 SLC9A9Q8IVB4 645 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms