RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 LENG1Q96BZ8 264 aaPredicted RBP7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 RHOVQ96L33 236 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 RUSC1Q9BVN2 902 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 ADAMTS1Q9UHI8 967 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 USP21Q9UK80 565 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 GARTP22102 1010 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 GSK3AP49840 483 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 PWP1Q13610 501 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 SEPT6Q14141 434 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 EXOSC6Q5RKV6 272 aaKnown RBP7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 DCAF11Q8TEB1 546 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 JARID2Q92833 1246 aaPredicted RBP7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 DCAF5Q96JK2 942 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 CACNA2D2Q9NY47 1150 aa7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.03□□□□□ -1.28
RNU6-560P-201ENST00000364007 C9orf172C9J069 976 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 F8W735 103 aaPredicted RBP7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 APBA3O96018 575 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 EIF4A3P38919 411 aaKnown RBP7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 CDK8P49336 464 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 LMNB2Q03252 620 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 FBXL19Q6PCT2 694 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 BNC2Q6ZN30 1099 aaPredicted RBP7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 TMEM130Q8N3G9 435 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 GAL3ST3Q96A11 431 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 WDR18Q9BV38 432 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 TMPRSS13Q9BYE2 586 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 ACBD3Q9H3P7 528 aa7.02□□□□□ -1.29
RNU6-560P-201ENST00000364007 MEGF11A6BM72 1044 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 AOC2O75106 756 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 TRIM37O94972 964 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 LMNB1P20700 586 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 NOS3P29474 1203 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 CHRNA4P43681 627 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 AKAP4Q5JQC9 854 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 TRIM42Q8IWZ5 723 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 GOLM1Q8NBJ4 401 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 ZNF296Q8WUU4 475 aaPredicted RBP7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 ACSBG1Q96GR2 724 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 AKTIPQ9H8T0 292 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 KRT82Q9NSB4 513 aa7.01□□□□□ -1.29
RNU6-560P-201ENST00000364007 RNF225M0QZC1 329 aaPredicted RBP7□□□□□ -1.29
RNU6-560P-201ENST00000364007 F13A1P00488 732 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 DRD2P14416 443 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 TNNI2P48788 182 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 RASSF7Q02833 373 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 KCNMA1Q12791 1236 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 INPP5AQ14642 412 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 KIF4BQ2VIQ3 1234 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 NUTM2GQ5VZR2 741 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 CD163Q86VB7 1156 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 ZNF654Q8IZM8 581 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 NACC1Q96RE7 527 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 SPON2Q9BUD6 331 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 TGIF2Q9GZN2 237 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 RNF208Q9H0X6 261 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 MIR1-1HGQ9H1L0 117 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 PCDHA4Q9UN74 947 aa7□□□□□ -1.29
RNU6-560P-201ENST00000364007 C1QTNF9BB2RNN3 333 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 GREM1O60565 184 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 ADGRE1Q14246 886 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 MBTPS1Q14703 1052 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 ALYREFQ86V81 257 aaKnown RBP6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 C12orf50Q8NA57 414 aaPredicted RBP6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 FBXO27Q8NI29 283 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 EAF1Q96JC9 268 aaPredicted RBP6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 PPP1R9AQ9ULJ8 1098 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 PCDHGC5Q9Y5F6 944 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 CSADQ9Y600 493 aa6.99□□□□□ -1.29
RNU6-560P-201ENST00000364007 FAM221AA4D161 298 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 DCDC2CA8MYV0 355 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 TLR3O15455 904 aaKnown RBP6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 NRG1Q02297 640 aaPredicted RBP6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 C12orf40Q86WS4 652 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 KIAA0825Q8IV33 1275 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 SMG8Q8ND04 991 aaKnown RBP6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 UBL7Q96S82 380 aaPredicted RBP6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 CYP4F12Q9HCS2 524 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 KCNQ5Q9NR82 932 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 UBP1Q9NZI7 540 aa6.98□□□□□ -1.29
RNU6-560P-201ENST00000364007 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 ITGB2P05107 769 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 GLB1P16278 677 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 SOX4Q06945 474 aaPredicted RBP6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 PAK2Q13177 524 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 ZC3H12AQ5D1E8 599 aaKnown RBP6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 HP1BP3Q5SSJ5 553 aaPredicted RBP6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 SCARA3Q6AZY7 606 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 LRFN4Q6PJG9 635 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 GATAD2BQ8WXI9 593 aa6.97□□□□□ -1.29
RNU6-560P-201ENST00000364007 MEGF10Q96KG7 1140 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms