RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 GOLGA8FQ08AF8 430 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 GOLGA8DPQ0D2H9 430 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 POSTNQ15063 836 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 WHAMMP3Q1A5X7 153 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 TUBB8Q3ZCM7 444 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 SLC9C2Q5TAH2 1124 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 SUCLG2Q96I99 432 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 CMA1P23946 247 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 RILPL1Q5EBL4 403 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 SYNRGQ9UMZ2 1314 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 SND1Q7KZF4 910 aaKnown RBP eCLIP18.05■□□□□ 0.482e-7■■■□□ 15.6
CLSTN1-201ENST00000361311 CPLX4Q7Z7G2 160 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 STRN4Q9NRL3 753 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 FAN1Q9Y2M0 1017 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 TIMM10P62072 90 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 SCRN1Q12765 414 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 PPFIA1Q13136 1202 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 CDC23Q9UJX2 597 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 GCOM1H8Y6P7 765 aaPredicted RBP18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 MYZAPP0CAP1 466 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 TRIM14Q14142 442 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 KRT40Q6A162 431 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 KRT23Q9C075 422 aa18.05■□□□□ 0.48
CLSTN1-201ENST00000361311 A0A1B0GUA9 196 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 HOXB7P09629 217 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 CCDC40Q4G0X9 1142 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 GIGYF2Q6Y7W6 1299 aaKnown RBP18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 CCDC43Q96MW1 224 aaKnown RBP18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 ADAM21Q9UKJ8 722 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 PHF8Q9UPP1 1060 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 GYS2P54840 703 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 AMPD3Q01432 767 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 IQUBQ8NA54 791 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 MMRN2Q9H8L6 949 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 FAM204AQ9H8W3 233 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 ZCCHC17Q9NP64 241 aaKnown RBP18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 ST7Q9NRC1 585 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 NAA25Q14CX7 972 aa18.04■□□□□ 0.48
CLSTN1-201ENST00000361311 E7EWF7 191 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 ARHGAP25P42331 645 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 BCAS4Q8TDM0 211 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 CNNM2Q9H8M5 875 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 EXOC1Q9NV70 894 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 ANKRD18AQ8IVF6 992 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 CTNND2Q9UQB3 1225 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 RESTQ13127 1097 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 PRPF4BQ13523 1007 aaKnown RBP18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 ZNF274Q96GC6 653 aaPredicted RBP18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 DDX21Q9NR30 783 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 FBXO18Q8NFZ0 1043 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 TTC14Q96N46 770 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 RTEL1Q9NZ71 1219 aa18.03■□□□□ 0.48
CLSTN1-201ENST00000361311 PTPN21Q16825 1174 aa18.02■□□□□ 0.48
CLSTN1-201ENST00000361311 CLIC4Q9Y696 253 aa18.02■□□□□ 0.48
CLSTN1-201ENST00000361311 PGBD1Q96JS3 809 aa18.02■□□□□ 0.48
CLSTN1-201ENST00000361311 ANGEL1Q9UNK9 670 aaKnown RBP18.02■□□□□ 0.48
CLSTN1-201ENST00000361311 CAPN7Q9Y6W3 813 aa18.02■□□□□ 0.48
CLSTN1-201ENST00000361311 IKBKBO14920 756 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 TAF5LO75529 589 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 HPDP32754 393 aaPredicted RBP18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 DIS3L2Q8IYB7 885 aaKnown RBP18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 ATP5JP18859 108 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 ANKS4BQ8N8V4 417 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 JAKMIP2Q96AA8 810 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 SAR1BQ9Y6B6 198 aa18.02■□□□□ 0.47
CLSTN1-201ENST00000361311 NECTIN1Q15223 517 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 PI4K2BQ8TCG2 481 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 PBRM1Q86U86 1689 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 PHKBQ93100 1093 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 TRPM2O94759 1503 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 GNGT1P63211 74 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
CLSTN1-201ENST00000361311 SLFN14P0C7P3 912 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 CCT5P48643 541 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 ZNF827Q17R98 1081 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 RSRC1Q96IZ7 334 aaKnown RBP18■□□□□ 0.47
CLSTN1-201ENST00000361311 TAB2Q9NYJ8 693 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 ICE2Q659A1 982 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 NSUN7Q8NE18 718 aaKnown RBP18■□□□□ 0.47
CLSTN1-201ENST00000361311 CALML4Q96GE6 196 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 CC2D1AQ6P1N0 951 aaPredicted RBP18■□□□□ 0.47
CLSTN1-201ENST00000361311 EFCAB13Q8IY85 973 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 PRDM11Q9NQV5 511 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 MYOM2P54296 1465 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 SLC5A1P13866 664 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 CYP2C19P33261 490 aa18■□□□□ 0.47
CLSTN1-201ENST00000361311 CCDC51Q96ER9 411 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms