RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ORC1Q13415 861 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 DHCR24Q15392 516 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 EPM2AIP1Q7L775 607 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 GJA10Q969M2 543 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 DNAJC7Q99615 494 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 ARPC5LQ9BPX5 153 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 PDZRN3Q9UPQ7 1066 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 POLR3KQ9Y2Y1 108 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 USP32Q8NFA0 1604 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 PTPRGP23470 1445 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 LTBP3Q9NS15 1303 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 PLCH1Q4KWH8 1693 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 SHTN1A0MZ66 631 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 TRIM75PA6NK02 468 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 C11orf95C9JLR9 678 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 ALDH1L1O75891 902 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 DNAJC8O75937 253 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 FAM13AO94988 1023 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 ZNF252P-AS1Q0IIN9 211 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 TTF1Q15361 905 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 FOXD4L6Q3SYB3 417 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 FOXD4L3Q6VB84 417 aaPredicted RBP2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 AMIGO3Q86WK7 504 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 ARHGEF4Q9NR80 690 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 NPFFR2Q9Y5X5 522 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 LTBP4Q8N2S1 1624 aa2.62□□□□□ -1.99
SMARCAD1-202ENST00000359052 GAPVD1Q14C86 1478 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 NRXN1Q9ULB1 1477 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 NHSL1Q5SYE7 1610 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 AKAP12Q02952 1782 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 CDK2AP1O14519 115 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 PGM3O95394 542 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ITPKAP23677 461 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 RPIAP49247 311 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 NFE2L2Q16236 605 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 SH3PXD2AQ5TCZ1 1133 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 CCDC102BQ68D86 513 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ALG1LQ6GMV1 187 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 PNMA8AQ86V59 439 aaPredicted RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 TPCN2Q8NHX9 752 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 LRCH3Q96II8 777 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 RSRC1Q96IZ7 334 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ZRANB1Q9UGI0 708 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 PCDHGC5Q9Y5F6 944 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 GIPC1O14908 333 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 SHOXO15266 292 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 CD44P16070 742 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 CCDC84Q86UT8 332 aaPredicted RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ST13P5Q8NFI4 369 aaPredicted RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ANLNQ9NQW6 1124 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 SWAP70Q9UH65 585 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 MYT1LQ9UL68 1186 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ADGRB2O60241 1585 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 SORBS3O60504 671 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 TFE3P19532 575 aaPredicted RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 NTF4P34130 210 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 EIF4G2P78344 907 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ARID5AQ03989 594 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 NBPF1Q3BBV0 1214 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 AGMOQ6ZNB7 445 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ATCAYQ86WG3 371 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 HNRNPLLQ8WVV9 542 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 PSMD1Q99460 953 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ALG13Q9NP73 1137 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 C11orf16Q9NQ32 467 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 DDX60Q8IY21 1712 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 CCDC189A1A4V9 331 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 DNAJC6O75061 913 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 LMNB1P20700 586 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 ADD1P35611 737 aaKnown RBP2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 FILIP1Q7Z7B0 1213 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 CREB3L4Q8TEY5 395 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 PRDM10Q9NQV6 1147 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 RXFP3Q9NSD7 469 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 KLHL11Q9NVR0 708 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 RREB1Q92766 1687 aa2.61□□□□□ -1.99
SMARCAD1-202ENST00000359052 NRAPQ86VF7 1730 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 MED14O60244 1454 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SCGB1D2O95969 90 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 ATP2B1P20020 1258 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SDSP20132 328 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 RASA1P20936 1047 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 INPP5BP32019 993 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 KCNQ4P56696 695 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 GJA9P57773 515 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SLC10A6Q3KNW5 377 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 CCDC93Q567U6 631 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 LAPTM4BQ86VI4 370 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SLC41A1Q8IVJ1 513 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 AIFM3Q96NN9 605 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 TMPRSS11EQ9UL52 423 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 MAPRE3Q9UPY8 281 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 VPS9D1Q9Y2B5 631 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 KIAA1551Q9HCM1 1747 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SEMA3FQ13275 785 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 PKN2Q16513 984 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 LSRQ86X29 649 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SPNS2Q8IVW8 549 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 RNF152Q8N8N0 203 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms