RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MCMDC2Q4G0Z9 681 aa30.56■■■□□ 2.48
SSBP3-202ENST00000357475 TRPM4Q8TD43 1214 aa30.56■■■□□ 2.48
SSBP3-202ENST00000357475 ESYT1Q9BSJ8 1104 aa30.56■■■□□ 2.48
SSBP3-202ENST00000357475 GPAA1O43292 621 aa30.55■■■□□ 2.48
SSBP3-202ENST00000357475 SH3RF3Q8TEJ3 882 aaPredicted RBP30.55■■■□□ 2.48
SSBP3-202ENST00000357475 ZBED3Q96IU2 234 aaPredicted RBP30.55■■■□□ 2.48
SSBP3-202ENST00000357475 SCN4AP35499 1836 aa30.54■■■□□ 2.48
SSBP3-202ENST00000357475 SPDYE2BA6NHP3 402 aa30.54■■■□□ 2.48
SSBP3-202ENST00000357475 SPDYE6P0CI01 402 aa30.54■■■□□ 2.48
SSBP3-202ENST00000357475 RHBDL3P58872 404 aa30.54■■■□□ 2.48
SSBP3-202ENST00000357475 DLGAP5Q15398 846 aa30.54■■■□□ 2.48
SSBP3-202ENST00000357475 H7C1D1 291 aa30.53■■■□□ 2.48
SSBP3-202ENST00000357475 SGSM2O43147 1006 aa30.53■■■□□ 2.48
SSBP3-202ENST00000357475 NBPF9Q3BBW0 867 aa30.53■■■□□ 2.48
SSBP3-202ENST00000357475 CDC42EP5Q6NZY7 148 aa30.53■■■□□ 2.48
SSBP3-202ENST00000357475 AIDAQ96BJ3 306 aa30.53■■■□□ 2.48
SSBP3-202ENST00000357475 ASTN2O75129 1339 aaPredicted RBP30.53■■■□□ 2.48
SSBP3-202ENST00000357475 LMOD1P29536 600 aaPredicted RBP30.52■■■□□ 2.48
SSBP3-202ENST00000357475 PPP4CP60510 307 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 KIF4BQ2VIQ3 1234 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 VPS53Q5VIR6 699 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 TMED8Q6PL24 325 aaPredicted RBP30.52■■■□□ 2.48
SSBP3-202ENST00000357475 MTMR14Q8NCE2 650 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 ZNF526Q8TF50 670 aaPredicted RBP30.52■■■□□ 2.48
SSBP3-202ENST00000357475 STRBPQ96SI9 672 aaKnown RBP30.52■■■□□ 2.48
SSBP3-202ENST00000357475 TDRD3Q9H7E2 651 aaKnown RBP30.52■■■□□ 2.48
SSBP3-202ENST00000357475 FOCADQ5VW36 1801 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 WNT10BO00744 389 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 PRKAB2O43741 272 aa30.52■■■□□ 2.48
SSBP3-202ENST00000357475 HIRAP54198 1017 aaPredicted RBP30.52■■■□□ 2.48
SSBP3-202ENST00000357475 FOXP2O15409 715 aa30.51■■■□□ 2.47
SSBP3-202ENST00000357475 CACNB3P54284 484 aa30.51■■■□□ 2.47
SSBP3-202ENST00000357475 CASC1Q6TDU7 716 aa30.51■■■□□ 2.47
SSBP3-202ENST00000357475 USP40Q9NVE5 1235 aa30.51■■■□□ 2.47
SSBP3-202ENST00000357475 CCDC171Q6TFL3 1326 aa30.51■■■□□ 2.47
SSBP3-202ENST00000357475 SEC24BO95487 1268 aa30.5■■■□□ 2.47
SSBP3-202ENST00000357475 RUFY2Q8WXA3 655 aa30.5■■■□□ 2.47
SSBP3-202ENST00000357475 NOL10Q9BSC4 688 aaKnown RBP30.5■■■□□ 2.47
SSBP3-202ENST00000357475 HACL1Q9UJ83 578 aa30.5■■■□□ 2.47
SSBP3-202ENST00000357475 CLRN2A0PK11 232 aa30.49■■■□□ 2.47
SSBP3-202ENST00000357475 BAG3O95817 575 aa30.49■■■□□ 2.47
SSBP3-202ENST00000357475 SDR42E1Q8WUS8 393 aa30.49■■■□□ 2.47
SSBP3-202ENST00000357475 RAD50Q92878 1312 aa30.49■■■□□ 2.47
SSBP3-202ENST00000357475 BAZ2AQ9UIF9 1905 aaKnown RBP30.48■■■□□ 2.47
SSBP3-202ENST00000357475 ADARB2Q9NS39 739 aaKnown RBP30.48■■■□□ 2.47
SSBP3-202ENST00000357475 MMP14P50281 582 aa30.47■■■□□ 2.47
SSBP3-202ENST00000357475 SCAF8Q9UPN6 1271 aaKnown RBP30.47■■■□□ 2.47
SSBP3-202ENST00000357475 EPHX2P34913 555 aa30.47■■■□□ 2.47
SSBP3-202ENST00000357475 PTH1RQ03431 593 aa30.47■■■□□ 2.47
SSBP3-202ENST00000357475 NFIAQ12857 509 aa30.47■■■□□ 2.47
SSBP3-202ENST00000357475 TEX11Q8IYF3 940 aa30.47■■■□□ 2.47
SSBP3-202ENST00000357475 TAF1DQ9H5J8 278 aaPredicted RBP30.47■■■□□ 2.47
SSBP3-202ENST00000357475 RRAGCQ9HB90 399 aa30.47■■■□□ 2.47
SSBP3-202ENST00000357475 NAV1Q8NEY1 1877 aa30.46■■■□□ 2.47
SSBP3-202ENST00000357475 WDHD1O75717 1129 aaPredicted RBP30.46■■■□□ 2.47
SSBP3-202ENST00000357475 NMRK2Q9NPI5 230 aa30.46■■■□□ 2.47
SSBP3-202ENST00000357475 DDX4Q9NQI0 724 aaKnown RBP30.46■■■□□ 2.47
SSBP3-202ENST00000357475 ZNF70Q9UC06 446 aaPredicted RBP30.46■■■□□ 2.47
SSBP3-202ENST00000357475 SLC4A4Q9Y6R1 1079 aa30.46■■■□□ 2.47
SSBP3-202ENST00000357475 SPDYE2Q495Y8 402 aa30.45■■■□□ 2.47
SSBP3-202ENST00000357475 TGFBRAP1Q8WUH2 860 aa30.45■■■□□ 2.47
SSBP3-202ENST00000357475 POLR2AP24928 1970 aaKnown RBP30.45■■■□□ 2.46
SSBP3-202ENST00000357475 EPB41L4AQ9HCS5 686 aaPredicted RBP30.44■■■□□ 2.46
SSBP3-202ENST00000357475 DDX60LQ5H9U9 1706 aaKnown RBP30.43■■■□□ 2.46
SSBP3-202ENST00000357475 GSG1L2A8MUP6 293 aa30.43■■■□□ 2.46
SSBP3-202ENST00000357475 HSPD1P10809 573 aaKnown RBP30.43■■■□□ 2.46
SSBP3-202ENST00000357475 CRNKL1Q9BZJ0 848 aaKnown RBP30.43■■■□□ 2.46
SSBP3-202ENST00000357475 LSG1Q9H089 658 aaKnown RBP30.43■■■□□ 2.46
SSBP3-202ENST00000357475 IQCA1LA6NCM1 817 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 PLCG2P16885 1265 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 PICALMQ13492 652 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 MAPKAPK5Q8IW41 473 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 ANO2Q9NQ90 1003 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 FAM198AQ9UFP1 575 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 MYH1P12882 1939 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 ZFPM1Q8IX07 1006 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 VEZTQ9HBM0 779 aa30.42■■■□□ 2.46
SSBP3-202ENST00000357475 TCP10L2B9ZVM9 353 aa30.41■■■□□ 2.46
SSBP3-202ENST00000357475 POTEIP0CG38 1075 aa30.41■■■□□ 2.46
SSBP3-202ENST00000357475 POTEJP0CG39 1038 aa30.41■■■□□ 2.46
SSBP3-202ENST00000357475 FLT1P17948 1338 aa30.4■■■□□ 2.46
SSBP3-202ENST00000357475 PATL2C9JE40 543 aaKnown RBP30.4■■■□□ 2.46
SSBP3-202ENST00000357475 APPP05067 770 aa30.4■■■□□ 2.46
SSBP3-202ENST00000357475 USP5P45974 858 aa30.4■■■□□ 2.46
SSBP3-202ENST00000357475 MFAP1P55081 439 aaKnown RBP30.4■■■□□ 2.46
SSBP3-202ENST00000357475 ANGEL2Q5VTE6 544 aaKnown RBP30.4■■■□□ 2.46
SSBP3-202ENST00000357475 DCP1AQ9NPI6 582 aaPredicted RBP30.4■■■□□ 2.46
SSBP3-202ENST00000357475 MKRN1Q9UHC7 482 aaKnown RBP30.4■■■□□ 2.46
SSBP3-202ENST00000357475 MYO1BO43795 1136 aa30.39■■■□□ 2.46
SSBP3-202ENST00000357475 EVX2Q03828 476 aa30.39■■■□□ 2.46
SSBP3-202ENST00000357475 TCP10Q12799 353 aa30.39■■■□□ 2.46
SSBP3-202ENST00000357475 EAPPQ56P03 285 aaPredicted RBP30.39■■■□□ 2.46
SSBP3-202ENST00000357475 USP50Q70EL3 339 aaPredicted RBP30.39■■■□□ 2.46
SSBP3-202ENST00000357475 BACH2Q9BYV9 841 aa30.39■■■□□ 2.46
SSBP3-202ENST00000357475 GGA3Q9NZ52 723 aa30.39■■■□□ 2.46
SSBP3-202ENST00000357475 CNTNAP1P78357 1384 aa30.39■■■□□ 2.46
SSBP3-202ENST00000357475 GNAT2P19087 354 aa30.38■■■□□ 2.45
SSBP3-202ENST00000357475 SLC4A8Q2Y0W8 1093 aa30.38■■■□□ 2.45
SSBP3-202ENST00000357475 CERS3Q8IU89 383 aa30.38■■■□□ 2.45
SSBP3-202ENST00000357475 IFNL3Q8IZI9 196 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms