RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 KCND1Q9NSA2 647 aa20.5■□□□□ 0.87
GYPC-202ENST00000356887 USP27XA6NNY8 438 aa20.49■□□□□ 0.87
GYPC-202ENST00000356887 NYAP1Q6ZVC0 841 aa20.49■□□□□ 0.87
GYPC-202ENST00000356887 IMPACTQ9P2X3 320 aa20.49■□□□□ 0.87
GYPC-202ENST00000356887 WDHD1O75717 1129 aaPredicted RBP20.49■□□□□ 0.87
GYPC-202ENST00000356887 PFKFB1P16118 471 aa20.49■□□□□ 0.87
GYPC-202ENST00000356887 GSDMDP57764 484 aa20.49■□□□□ 0.87
GYPC-202ENST00000356887 NCBP1Q09161 790 aaKnown RBP20.49■□□□□ 0.87
GYPC-202ENST00000356887 ZRSR1Q15695 479 aaKnown RBP20.49■□□□□ 0.87
GYPC-202ENST00000356887 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
GYPC-202ENST00000356887 METAP2P50579 478 aaKnown RBP eCLIP20.48■□□□□ 0.873e-7■■□□□ 14.3
GYPC-202ENST00000356887 CCDC112Q8NEF3 446 aa20.48■□□□□ 0.87
GYPC-202ENST00000356887 AIFM3Q96NN9 605 aa20.48■□□□□ 0.87
GYPC-202ENST00000356887 ZNF532Q9HCE3 1301 aa20.48■□□□□ 0.87
GYPC-202ENST00000356887 IRS4O14654 1257 aaPredicted RBP20.47■□□□□ 0.87
GYPC-202ENST00000356887 CDKL5O76039 1030 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 PDE8BO95263 885 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 TIGD1Q96MW7 591 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 WNK3Q9BYP7 1800 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 TCRBV5S4A2TA0A5A2 114 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 IDH1O75874 414 aaKnown RBP20.47■□□□□ 0.87
GYPC-202ENST00000356887 PDE6AP16499 860 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 ARID4AP29374 1257 aaPredicted RBP20.47■□□□□ 0.87
GYPC-202ENST00000356887 CCDC102BQ68D86 513 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 KRT40Q6A162 431 aa20.47■□□□□ 0.87
GYPC-202ENST00000356887 APPP05067 770 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 CDC27P30260 824 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 NCAPHQ15003 741 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 PTPN14Q15678 1187 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 ALX1Q15699 326 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 CCAR2Q8N163 923 aaKnown RBP20.46■□□□□ 0.87
GYPC-202ENST00000356887 IGDCC4Q8TDY8 1250 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 TMEM87BQ96K49 555 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 SENP2Q9HC62 589 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 MYO5AQ9Y4I1 1855 aaKnown RBP20.46■□□□□ 0.87
GYPC-202ENST00000356887 MROH7-TTC4A0A0A0MT08 1334 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 BIN1O00499 593 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 PPP6R2O75170 966 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 UQCRFS1P1P0C7P4 283 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 HSPA1LP34931 641 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 PHKA1P46020 1223 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 VPS37DQ86XT2 251 aa20.46■□□□□ 0.87
GYPC-202ENST00000356887 STRBPQ96SI9 672 aaKnown RBP20.46■□□□□ 0.87
GYPC-202ENST00000356887 XPO4Q9C0E2 1151 aaKnown RBP20.46■□□□□ 0.87
GYPC-202ENST00000356887 MYH3P11055 1940 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 B4E1Z4 1266 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 CYP19A1P11511 503 aaPredicted RBP20.45■□□□□ 0.86
GYPC-202ENST00000356887 MARCKSP29966 332 aaPredicted RBP20.45■□□□□ 0.86
GYPC-202ENST00000356887 PTPAQ15257 358 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 CPLX2Q6PUV4 134 aaKnown RBP20.45■□□□□ 0.86
GYPC-202ENST00000356887 IFNKQ9P0W0 207 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 TRMT112Q9UI30 125 aaKnown RBP20.45■□□□□ 0.86
GYPC-202ENST00000356887 WWC3Q9ULE0 1092 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 HPSEQ9Y251 543 aa20.45■□□□□ 0.86
GYPC-202ENST00000356887 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 PDE8AO60658 829 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 NTRK3Q16288 839 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.44■□□□□ 0.86
GYPC-202ENST00000356887 SLIT2O94813 1529 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 ANKRD36CQ5JPF3 1778 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 RXRAP19793 462 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 TPM4P67936 248 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 SGMS1Q86VZ5 419 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 ZNF592Q92610 1267 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 PHKBQ93100 1093 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 MAP3K14Q99558 947 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 LY9Q9HBG7 655 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 FAM217BQ9NTX9 383 aaPredicted RBP20.44■□□□□ 0.86
GYPC-202ENST00000356887 TUBE1Q9UJT0 475 aa20.44■□□□□ 0.86
GYPC-202ENST00000356887 LRP6O75581 1613 aa20.43■□□□□ 0.86
GYPC-202ENST00000356887 ZBTB43O43298 467 aa20.43■□□□□ 0.86
GYPC-202ENST00000356887 FGFR2P21802 821 aa20.43■□□□□ 0.86
GYPC-202ENST00000356887 SYKP43405 635 aa20.43■□□□□ 0.86
GYPC-202ENST00000356887 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
GYPC-202ENST00000356887 ITGB4P16144 1822 aa20.43■□□□□ 0.86
GYPC-202ENST00000356887 IKBKBO14920 756 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 SMC2O95347 1197 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 U2AF2P26368 475 aaKnown RBP eCLIP20.42■□□□□ 0.86
GYPC-202ENST00000356887 CBX1P83916 185 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 SHC4Q6S5L8 630 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 JMYQ8N9B5 988 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 LPIN2Q92539 896 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 TRMT1Q9NXH9 659 aaKnown RBP20.42■□□□□ 0.86
GYPC-202ENST00000356887 DISP2A7MBM2 1401 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
GYPC-202ENST00000356887 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
GYPC-202ENST00000356887 PUM3Q15397 648 aaKnown RBP20.42■□□□□ 0.86
GYPC-202ENST00000356887 ARMCX5Q6P1M9 558 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 TMC6Q7Z403 805 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 MICU3Q86XE3 530 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 CCDC150Q8NCX0 1101 aa20.42■□□□□ 0.86
GYPC-202ENST00000356887 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
GYPC-202ENST00000356887 IPO4Q8TEX9 1081 aaKnown RBP20.41■□□□□ 0.86
GYPC-202ENST00000356887 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
GYPC-202ENST00000356887 SPATA31A6Q5VVP1 1343 aa20.41■□□□□ 0.86
GYPC-202ENST00000356887 ECM29Q5VYK3 1845 aa20.41■□□□□ 0.86
GYPC-202ENST00000356887 GOLGA8AA7E2F4 631 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms