RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 IGHDP01880 384 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.352e-7■■□□□ 12.6
SPTBN1-202ENST00000356805 HPDP32754 393 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 IRX4P78413 519 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 SDCCAG8Q86SQ7 713 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 MYL5Q02045 173 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
SPTBN1-202ENST00000356805 MAGEB6P1A0A0J9YX57 407 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 PPARDQ03181 441 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 ZNF804AQ7Z570 1209 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 GOLGA6BA6NDN3 693 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 STX17P56962 302 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 MTUS1Q9ULD2 1270 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■■■■□ 19.7
SPTBN1-202ENST00000356805 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 LEO1Q8WVC0 666 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 CASQ2O14958 399 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 NEDD9Q14511 834 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 HS2ST1Q7LGA3 356 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 SLC8A3P57103 927 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 CABS1Q96KC9 395 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 TTLL3Q9Y4R7 772 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 TNNI2P48788 182 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
SPTBN1-202ENST00000356805 SPTLC2O15270 562 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 TRAF1Q13077 416 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 FAM114A2Q9NRY5 505 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 FOXO3O43524 673 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 SDSP20132 328 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 FYB2Q5VWT5 728 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 KIFAP3Q92845 792 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 TRIM6Q9C030 488 aaPredicted RBP12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 CALCOCO2Q13137 446 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 STX10O60499 249 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 ZNF131P52739 623 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 SETD1BQ9UPS6 1966 aaKnown RBP12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 UQCRFS1P1P0C7P4 283 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 RNASE9P60153 205 aaKnown RBP12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 BIRC3Q13489 604 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 RLBP1P12271 317 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 PLCB1Q9NQ66 1216 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPTBN1-202ENST00000356805 BCAP29Q9UHQ4 241 aa12.83□□□□□ -0.35
SPTBN1-202ENST00000356805 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 NME9Q86XW9 330 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 ARHGEF2Q92974 986 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 BRF1Q92994 677 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 LARSQ9P2J5 1176 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 GCKP35557 465 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 TCEANC2Q96MN5 208 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 INSRP06213 1382 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 KRT79Q5XKE5 535 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 SUDS3Q9H7L9 328 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 IFNKQ9P0W0 207 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 OAS2P29728 719 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 TEX13AQ9BXU3 409 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 GNAQP50148 359 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 EFCAB13Q8IY85 973 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 MAGEB6Q8N7X4 407 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 CCDC89Q8N998 374 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
SPTBN1-202ENST00000356805 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 ELF2Q15723 593 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 DTHD1Q6ZMT9 781 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 DACT3Q96B18 629 aaPredicted RBP12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 CTNND2Q9UQB3 1225 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 SPOPO43791 374 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 717.5 ms