RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 UTP14CQ5TAP6 766 aaKnown RBP7.31□□□□□ -1.24
TTC3-201ENST00000354749 SPATS2Q86XZ4 545 aaKnown RBP7.31□□□□□ -1.24
TTC3-201ENST00000354749 FANCAO15360 1455 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 OAS2P29728 719 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 LMBR1LQ6UX01 489 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 TAOK1Q7L7X3 1001 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 MLKLQ8NB16 471 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 NOC4LQ9BVI4 516 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 TXNDC16Q9P2K2 825 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 AMOTL2Q9Y2J4 779 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 UTP11Q9Y3A2 253 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 GPATCH8Q9UKJ3 1502 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 BIVM-ERCC5R4GMW8 1640 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 C6orf229H3BNL8 230 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 CLGNO14967 610 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 PSMC4P43686 418 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 ZNF804AQ7Z570 1209 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 NBPF5PQ86XG9 351 aaPredicted RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 URB2Q14146 1524 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 UHRF1BP1Q6BDS2 1440 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 TMEM110-MUSTN1A8MSY1 372 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 NDC80O14777 642 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 BRD3Q15059 726 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 BLMP54132 1417 aaPredicted RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 DEXIO95424 95 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 CCT6AP40227 531 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 DTHD1Q6ZMT9 781 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 NPC1L1Q9UHC9 1359 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 SH3BGRP55822 239 aaPredicted RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 SV2BQ7L1I2 683 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 ARHGAP24Q8N264 748 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 MCUR1Q96AQ8 359 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 SHANK2Q9UPX8 1470 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 MAGEB6P1A0A0J9YX57 407 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 VAMP4O75379 141 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 SEC24BO95487 1268 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 CEP85LQ5SZL2 805 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 FEZ2Q9UHY8 353 aaPredicted RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 CUTAO60888 179 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 ANXA1P04083 346 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 VIMP08670 466 aaKnown RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 ARID4AP29374 1257 aaPredicted RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 C16orf71Q8IYS4 520 aaPredicted RBP7.3□□□□□ -1.24
TTC3-201ENST00000354749 NUP58Q9BVL2 599 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 FRMD4BQ9Y2L6 1034 aa7.3□□□□□ -1.24
TTC3-201ENST00000354749 VWA3AA6NCI4 1184 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 ZNF500O60304 480 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 RPUSD2Q8IZ73 545 aaKnown RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 LEO1Q8WVC0 666 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 CBX8Q9HC52 389 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 ARL1P40616 181 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 IDI1Q13907 227 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 AKAP4Q5JQC9 854 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 CCDC62Q6P9F0 684 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 KIFAP3Q92845 792 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 EPB41P11171 864 aaKnown RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 TPD52P55327 224 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 PAK1Q13153 545 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 CCDC38Q502W7 563 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 C17orf53Q8N3J3 647 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 CCDC51Q96ER9 411 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 CASQ2O14958 399 aaPredicted RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 VCXQ9H320 206 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 PLCB1Q9NQ66 1216 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 TBC1D8BQ0IIM8 1120 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 WHAMMP3Q1A5X7 153 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 COPS6Q7L5N1 327 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 SARNPP82979 210 aaKnown RBP7.29□□□□□ -1.24
TTC3-201ENST00000354749 TFCP2Q12800 502 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 SYCE1Q8N0S2 351 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 RIMS2Q9UQ26 1411 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 CFAP43Q8NDM7 1665 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 SPOPO43791 374 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 FCHSD1Q86WN1 690 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 SMC1BQ8NDV3 1235 aa7.29□□□□□ -1.24
TTC3-201ENST00000354749 TRAF5O00463 557 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 KIF3CO14782 793 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 GMNNO75496 209 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 NLRP12P59046 1061 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 NPATQ14207 1427 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 CFAP221Q4G0U5 840 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 TMEM87BQ96K49 555 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 SETSIPP0DME0 302 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 ERCC5P28715 1186 aaPredicted RBP7.28□□□□□ -1.24
TTC3-201ENST00000354749 MAP2K2P36507 400 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 ERCC6LQ2NKX8 1250 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 CABS1Q96KC9 395 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 PA2G4Q9UQ80 394 aaKnown RBP7.28□□□□□ -1.24
TTC3-201ENST00000354749 DENND4BO75064 1496 aaPredicted RBP7.28□□□□□ -1.24
TTC3-201ENST00000354749 FLOT1O75955 427 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 USH1CQ9Y6N9 552 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 I3L4J1 428 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 EIF4A2Q14240 407 aaKnown RBP7.28□□□□□ -1.24
TTC3-201ENST00000354749 TRMT1LQ7Z2T5 733 aaKnown RBP7.28□□□□□ -1.24
TTC3-201ENST00000354749 PHLDB2Q86SQ0 1253 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 LMBRD1Q9NUN5 540 aa7.28□□□□□ -1.24
TTC3-201ENST00000354749 ABCC1P33527 1531 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms