RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CHD1LQ86WJ1 897 aa10.15□□□□□ -0.78
CD44-205ENST00000352818 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.78
CD44-205ENST00000352818 ANP32EQ9BTT0 268 aa10.15□□□□□ -0.78
CD44-205ENST00000352818 GGA1Q9UJY5 639 aa10.15□□□□□ -0.78
CD44-205ENST00000352818 G3V3G9 751 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 FOSL2P15408 326 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 IREB2P48200 963 aaKnown RBP10.14□□□□□ -0.79
CD44-205ENST00000352818 GTF2A2P52657 109 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 DCAF8Q5TAQ9 597 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 HDGFL1Q5TGJ6 251 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 ERICH6Q7L0X2 663 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 G2E3Q7L622 706 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 OGFOD1Q8N543 542 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 SLAIN1Q8ND83 568 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 ADAMTS19Q8TE59 1207 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 LRFN3Q9BTN0 628 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 SEC31BQ9NQW1 1179 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 OTOFQ9HC10 1997 aa10.14□□□□□ -0.79
CD44-205ENST00000352818 ZNF804BA4D1E1 1349 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 PFASO15067 1338 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
CD44-205ENST00000352818 ANXA1P04083 346 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 VGLL4Q14135 290 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 KIAA0825Q8IV33 1275 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 DCTPP1Q9H773 170 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 C1orf115Q9H7X2 142 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
CD44-205ENST00000352818 ADCY3O60266 1144 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 GNAI3P08754 354 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 SUPT20HL1Q3ZLR7 823 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 STRIP1Q5VSL9 837 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 NECAB3Q96P71 396 aaPredicted RBP10.12□□□□□ -0.79
CD44-205ENST00000352818 UHRF1Q96T88 793 aaPredicted RBP10.12□□□□□ -0.79
CD44-205ENST00000352818 MEIS3Q99687 375 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 ZCCHC17Q9NP64 241 aaKnown RBP10.12□□□□□ -0.79
CD44-205ENST00000352818 ANKIB1Q9P2G1 1089 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
CD44-205ENST00000352818 PPP2R3BQ9Y5P8 575 aa10.12□□□□□ -0.79
CD44-205ENST00000352818 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 HMMRO75330 724 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 CAPN2P17655 700 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 HOXD10P28358 340 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 FKBP5Q13451 457 aaPredicted RBP10.11□□□□□ -0.79
CD44-205ENST00000352818 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 HELBQ8NG08 1087 aaPredicted RBP10.11□□□□□ -0.79
CD44-205ENST00000352818 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 ASB2Q96Q27 587 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
CD44-205ENST00000352818 GNAI2P04899 355 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 FLT3LGP49771 235 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 RASA3Q14644 834 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 TXNRD3Q86VQ6 643 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.1□□□□□ -0.79
CD44-205ENST00000352818 TEPSINQ96N21 525 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 EPHX3Q9H6B9 360 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 C11orf49Q9H6J7 331 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 UPF2Q9HAU5 1272 aaKnown RBP10.1□□□□□ -0.79
CD44-205ENST00000352818 C11orf16Q9NQ32 467 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 DBF4Q9UBU7 674 aaPredicted RBP10.1□□□□□ -0.79
CD44-205ENST00000352818 HCN4Q9Y3Q4 1203 aa10.1□□□□□ -0.79
CD44-205ENST00000352818 MYO3BQ8WXR4 1341 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
CD44-205ENST00000352818 BCRP11274 1271 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 MRE11P49959 708 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 MOGSQ13724 837 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 CERS5Q8N5B7 392 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 PRMT6Q96LA8 375 aaPredicted RBP10.09□□□□□ -0.79
CD44-205ENST00000352818 LNPKQ9C0E8 428 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.09□□□□□ -0.79
CD44-205ENST00000352818 SNCAIPQ9Y6H5 919 aa10.09□□□□□ -0.79
CD44-205ENST00000352818 F6X3S4 739 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 IRF6O14896 467 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 CETPP11597 493 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 COL6A1P12109 1028 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 MMP14P50281 582 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 SHHQ15465 462 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 LRRC26Q2I0M4 334 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 C9orf50Q5SZB4 431 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 SLC4A10Q6U841 1118 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 ATXN2LQ8WWM7 1075 aaKnown RBP10.08□□□□□ -0.8
CD44-205ENST00000352818 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
CD44-205ENST00000352818 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
CD44-205ENST00000352818 XDHP47989 1333 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 MED23Q9ULK4 1368 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 SPDYE2BA6NHP3 402 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 SEC24BO95487 1268 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 SPDYE6P0CI01 402 aa10.07□□□□□ -0.8
CD44-205ENST00000352818 KLRK1P26718 216 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms