RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 FAM217BQ9NTX9 383 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 SMTNL1A8MU46 457 aa16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 B4E1Z4 1266 aa16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 APOA5Q6Q788 366 aa16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 PHKBQ93100 1093 aa16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-202ENST00000347545 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 FGFR2P21802 821 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 NCBP1Q09161 790 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 NCAPHQ15003 741 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 NTRK3Q16288 839 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 FILIP1Q7Z7B0 1213 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 IGDCC4Q8TDY8 1250 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 DOT1LQ8TEK3 1739 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 BIN1O00499 593 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 STRBPQ96SI9 672 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 COL4A1P02462 1669 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 SKILP12757 684 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 CMA1P23946 247 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 PTPAQ15257 358 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 NYAP1Q6ZVC0 841 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 ALG1Q9BT22 464 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-202ENST00000347545 SNAP23O00161 211 aa16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 KRT40Q6A162 431 aa16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 VPS37DQ86XT2 251 aa16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 HSD3B7Q9H2F3 369 aa16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-202ENST00000347545 NAA30Q147X3 362 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 HPSEQ9Y251 543 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 NEMFO60524 1076 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 PDE8AO60658 829 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 APPP05067 770 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 SLC3A2P08195 630 aaKnown RBP16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 NLRP12P59046 1061 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 PPP4R3BQ5MIZ7 849 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 RGS22Q8NE09 1264 aa16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF1-202ENST00000347545 CBX1P83916 185 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 XPO4Q9C0E2 1151 aaKnown RBP16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 TRDNQ13061 729 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 CEP135Q66GS9 1140 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 ZNF34Q8IZ26 560 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 A0A1B0GUL6 1792 aa16.85■□□□□ 0.29
ARHGEF1-202ENST00000347545 LAMB2P55268 1798 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 PUM3Q15397 648 aaKnown RBP16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 ALX1Q15699 326 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 ARMCX5Q6P1M9 558 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 ISM2Q6H9L7 571 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 SGMS1Q86VZ5 419 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 CCAR2Q8N163 923 aaKnown RBP16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 PDCL2Q8N4E4 241 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 KCND1Q9NSA2 647 aa16.84■□□□□ 0.29
ARHGEF1-202ENST00000347545 U2AF2P26368 475 aaKnown RBP eCLIP16.83■□□□□ 0.295e-6■■■□□ 17.8
ARHGEF1-202ENST00000347545 LPIN2Q92539 896 aa16.83■□□□□ 0.29
ARHGEF1-202ENST00000347545 TMEM87BQ96K49 555 aa16.83■□□□□ 0.29
ARHGEF1-202ENST00000347545 CLIC6Q96NY7 704 aa16.83■□□□□ 0.29
ARHGEF1-202ENST00000347545 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.29
ARHGEF1-202ENST00000347545 PAXBP1Q9Y5B6 917 aa16.83■□□□□ 0.29
ARHGEF1-202ENST00000347545 COL14A1Q05707 1796 aaKnown RBP16.83■□□□□ 0.29
ARHGEF1-202ENST00000347545 FAM237AA0A1B0GTK4 181 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 ZBTB43O43298 467 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 IFNL3Q8IZI9 196 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 SPATA5Q8NB90 893 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 ZSWIM5Q9P217 1185 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 TUBE1Q9UJT0 475 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 MYH6P13533 1939 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 MBD4O95243 580 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 UQCRFS1P1P0C7P4 283 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 DZIP3Q86Y13 1208 aaKnown RBP16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 MAGEB6Q8N7X4 407 aa16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
ARHGEF1-202ENST00000347545 RREB1Q92766 1687 aa16.82■□□□□ 0.28
ARHGEF1-202ENST00000347545 PPP6R2O75170 966 aa16.82■□□□□ 0.28
ARHGEF1-202ENST00000347545 SMAP1Q8IYB5 467 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF1-202ENST00000347545 AIDAQ96BJ3 306 aa16.82■□□□□ 0.28
ARHGEF1-202ENST00000347545 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms