RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 DHX8Q14562 1220 aaKnown RBP24.63■■□□□ 1.53
TRIM3-201ENST00000345851 GOLGA5Q8TBA6 731 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 GJB4Q9NTQ9 266 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 CARMIL3Q8ND23 1372 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 LONRF2Q1L5Z9 754 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 SRLQ86TD4 932 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 PDILTQ8N807 584 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
TRIM3-201ENST00000345851 SPTLC2O15270 562 aa24.62■■□□□ 1.53
TRIM3-201ENST00000345851 DBNLQ9UJU6 430 aaKnown RBP24.62■■□□□ 1.53
TRIM3-201ENST00000345851 MAP3K9P80192 1104 aa24.62■■□□□ 1.53
TRIM3-201ENST00000345851 MPHOSPH8Q99549 860 aa24.62■■□□□ 1.53
TRIM3-201ENST00000345851 PARP4Q9UKK3 1724 aaKnown RBP24.61■■□□□ 1.53
TRIM3-201ENST00000345851 MCM6Q14566 821 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 MCMDC2Q4G0Z9 681 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 PIGBQ92521 554 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 EXOC4Q96A65 974 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 DHX16O60231 1041 aaKnown RBP24.61■■□□□ 1.53
TRIM3-201ENST00000345851 DHX58Q96C10 678 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 VPS18Q9P253 973 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 MRFAP1Q9Y605 127 aa24.61■■□□□ 1.53
TRIM3-201ENST00000345851 FDPSP14324 419 aaKnown RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 MARCKSP29966 332 aaPredicted RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 RSRC2Q7L4I2 434 aaKnown RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 HDAC5Q9UQL6 1122 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 SALL1Q9NSC2 1324 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 PFKFB1P16118 471 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 PDIA3P30101 505 aaKnown RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 KARSQ15046 597 aaKnown RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 NKX1-1Q15270 411 aaPredicted RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 A0A087WZG4 1122 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 RAB11FIP4Q86YS3 637 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 KCNG4Q8TDN1 519 aa24.6■■□□□ 1.53
TRIM3-201ENST00000345851 GPHNQ9NQX3 736 aaPredicted RBP24.6■■□□□ 1.53
TRIM3-201ENST00000345851 ACTN2P35609 894 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 TOGARAM2Q6ZUX3 1019 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 VSTM4Q8IW00 320 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 DESI2Q9BSY9 194 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 EFCC1Q9HA90 598 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 ARHGAP6O43182 974 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 NOP2P46087 812 aaKnown RBP24.59■■□□□ 1.53
TRIM3-201ENST00000345851 PDE11AQ9HCR9 933 aa24.59■■□□□ 1.53
TRIM3-201ENST00000345851 IKBKBO14920 756 aa24.58■■□□□ 1.53
TRIM3-201ENST00000345851 CBFA2T2O43439 604 aa24.58■■□□□ 1.53
TRIM3-201ENST00000345851 TMEM139Q8IV31 216 aa24.58■■□□□ 1.53
TRIM3-201ENST00000345851 GOLGA1Q92805 767 aa24.58■■□□□ 1.53
TRIM3-201ENST00000345851 MYL5Q02045 173 aa24.58■■□□□ 1.53
TRIM3-201ENST00000345851 RABGGTAQ92696 567 aa24.58■■□□□ 1.53
TRIM3-201ENST00000345851 IRX2Q9BZI1 471 aaPredicted RBP24.58■■□□□ 1.53
TRIM3-201ENST00000345851 MROH7-TTC4A0A0A0MT08 1334 aa24.58■■□□□ 1.52
TRIM3-201ENST00000345851 HMGB1P09429 215 aaKnown RBP24.57■■□□□ 1.52
TRIM3-201ENST00000345851 FOXR1Q6PIV2 292 aa24.57■■□□□ 1.52
TRIM3-201ENST00000345851 LEKR1Q6ZMV7 388 aa24.57■■□□□ 1.52
TRIM3-201ENST00000345851 DNAJC10Q8IXB1 793 aa24.57■■□□□ 1.52
TRIM3-201ENST00000345851 BAG1Q99933 345 aaPredicted RBP24.57■■□□□ 1.52
TRIM3-201ENST00000345851 FANCLQ9NW38 375 aa24.57■■□□□ 1.52
TRIM3-201ENST00000345851 ADKP55263 362 aaKnown RBP24.57■■□□□ 1.52
TRIM3-201ENST00000345851 CCDC12Q8WUD4 166 aaPredicted RBP24.57■■□□□ 1.52
TRIM3-201ENST00000345851 C8orf76Q96K31 380 aa24.57■■□□□ 1.52
TRIM3-201ENST00000345851 SHANK3Q9BYB0 1731 aa24.57■■□□□ 1.52
TRIM3-201ENST00000345851 ATP5JP18859 108 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 TFCP2Q12800 502 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 PNOCQ13519 176 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 MYSM1Q5VVJ2 828 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 SYNE3Q6ZMZ3 975 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 DBNDD2Q9BQY9 259 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 GLI3P10071 1580 aa24.56■■□□□ 1.52
TRIM3-201ENST00000345851 EXOSC10Q01780 885 aaKnown RBP24.56■■□□□ 1.52
TRIM3-201ENST00000345851 PUF60Q9UHX1 559 aaKnown RBP24.56■■□□□ 1.52
TRIM3-201ENST00000345851 N4BP1O75113 896 aaKnown RBP24.55■■□□□ 1.52
TRIM3-201ENST00000345851 TXLNAP40222 546 aa24.55■■□□□ 1.52
TRIM3-201ENST00000345851 PLBD2Q8NHP8 589 aa24.55■■□□□ 1.52
TRIM3-201ENST00000345851 KIFC2Q96AC6 838 aa24.55■■□□□ 1.52
TRIM3-201ENST00000345851 E7EWF7 191 aa24.55■■□□□ 1.52
TRIM3-201ENST00000345851 SUGCTQ9HAC7 445 aa24.55■■□□□ 1.52
TRIM3-201ENST00000345851 UTYO14607 1347 aa24.55■■□□□ 1.52
TRIM3-201ENST00000345851 LAMA4Q16363 1823 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 WDHD1O75717 1129 aaPredicted RBP24.54■■□□□ 1.52
TRIM3-201ENST00000345851 YEATS4O95619 227 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 TNNI3KQ59H18 835 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 FCHSD1Q86WN1 690 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 INTS13Q9NVM9 706 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 POLR3EQ9NVU0 708 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 FPGT-TNNI3KV9GXZ4 949 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 ANKRD65E5RJM6 399 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 AXDND1Q5T1B0 1012 aaPredicted RBP24.54■■□□□ 1.52
TRIM3-201ENST00000345851 WWC2Q6AWC2 1192 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 PSD3Q9NYI0 1048 aa24.54■■□□□ 1.52
TRIM3-201ENST00000345851 CCDC151A5D8V7 595 aa24.53■■□□□ 1.52
TRIM3-201ENST00000345851 KIF28PB7ZC32 967 aa24.53■■□□□ 1.52
TRIM3-201ENST00000345851 SYKP43405 635 aa24.53■■□□□ 1.52
TRIM3-201ENST00000345851 KCPQ6ZWJ8 1503 aa24.52■■□□□ 1.52
TRIM3-201ENST00000345851 EXOC5O00471 708 aa24.52■■□□□ 1.52
TRIM3-201ENST00000345851 GTF2A1P52655 376 aaPredicted RBP24.52■■□□□ 1.52
TRIM3-201ENST00000345851 ANO1Q5XXA6 986 aa24.52■■□□□ 1.52
TRIM3-201ENST00000345851 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
TRIM3-201ENST00000345851 TOGARAM1Q9Y4F4 1720 aa24.52■■□□□ 1.52
TRIM3-201ENST00000345851 MAP2K7O14733 419 aa24.52■■□□□ 1.52
TRIM3-201ENST00000345851 PHACTR2O75167 634 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms