RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SIK1P57059 783 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 DHX40Q8IX18 779 aaKnown RBP24.92■■□□□ 1.58
CCDC38-201ENST00000344280 ALG1Q9BT22 464 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 LY9Q9HBG7 655 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 FAM13BQ9NYF5 915 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 WNK3Q9BYP7 1800 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 ARAP2Q8WZ64 1704 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 PATL2C9JE40 543 aaKnown RBP24.92■■□□□ 1.58
CCDC38-201ENST00000344280 CCDC144BQ3MJ40 725 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 MARCH10Q8NA82 808 aaPredicted RBP24.92■■□□□ 1.58
CCDC38-201ENST00000344280 KCNG4Q8TDN1 519 aa24.92■■□□□ 1.58
CCDC38-201ENST00000344280 MYH14Q7Z406 1995 aaKnown RBP24.91■■□□□ 1.58
CCDC38-201ENST00000344280 GOLGA6L19H0YKK7 550 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 YEATS4O95619 227 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 MAP3K12Q12852 859 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 FAM217BQ9NTX9 383 aaPredicted RBP24.91■■□□□ 1.58
CCDC38-201ENST00000344280 CLIP2Q9UDT6 1046 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 SDF4Q9BRK5 362 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 NAPBQ9H115 298 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 ZSWIM5Q9P217 1185 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 NIP7Q9Y221 180 aaKnown RBP eCLIP24.91■■□□□ 1.58
CCDC38-201ENST00000344280 COL4A1P02462 1669 aa24.91■■□□□ 1.58
CCDC38-201ENST00000344280 SPATA31A1Q5TZJ5 1347 aa24.9■■□□□ 1.58
CCDC38-201ENST00000344280 GSG1L2A8MUP6 293 aa24.9■■□□□ 1.58
CCDC38-201ENST00000344280 RANBP6O60518 1105 aaKnown RBP24.9■■□□□ 1.58
CCDC38-201ENST00000344280 ALX1Q15699 326 aa24.9■■□□□ 1.58
CCDC38-201ENST00000344280 NTRK3Q16288 839 aa24.9■■□□□ 1.58
CCDC38-201ENST00000344280 ANO1Q5XXA6 986 aa24.9■■□□□ 1.58
CCDC38-201ENST00000344280 SYNE3Q6ZMZ3 975 aa24.9■■□□□ 1.58
CCDC38-201ENST00000344280 NTSR2O95665 410 aa24.89■■□□□ 1.58
CCDC38-201ENST00000344280 TMEM67Q5HYA8 995 aa24.89■■□□□ 1.58
CCDC38-201ENST00000344280 AXDND1Q5T1B0 1012 aaPredicted RBP24.89■■□□□ 1.58
CCDC38-201ENST00000344280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.89■■□□□ 1.58
CCDC38-201ENST00000344280 LCORLQ8N3X6 602 aa24.89■■□□□ 1.58
CCDC38-201ENST00000344280 WDHD1O75717 1129 aaPredicted RBP24.89■■□□□ 1.57
CCDC38-201ENST00000344280 KRT40Q6A162 431 aa24.89■■□□□ 1.57
CCDC38-201ENST00000344280 NFXL1Q6ZNB6 911 aa24.89■■□□□ 1.57
CCDC38-201ENST00000344280 VPS37DQ86XT2 251 aa24.89■■□□□ 1.57
CCDC38-201ENST00000344280 MYRIPQ8NFW9 859 aa24.89■■□□□ 1.57
CCDC38-201ENST00000344280 TMEM87BQ96K49 555 aa24.89■■□□□ 1.57
CCDC38-201ENST00000344280 ANO10Q9NW15 660 aa24.89■■□□□ 1.57
CCDC38-201ENST00000344280 WTIPA6NIX2 430 aaPredicted RBP24.88■■□□□ 1.57
CCDC38-201ENST00000344280 ZBTB43O43298 467 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 MARCKSP29966 332 aaPredicted RBP24.88■■□□□ 1.57
CCDC38-201ENST00000344280 STK11IPQ8N1F8 1099 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 TSC1Q92574 1164 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 IQSEC3Q9UPP2 1182 aaPredicted RBP24.88■■□□□ 1.57
CCDC38-201ENST00000344280 DOCK2Q92608 1830 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 DYNC1I1O14576 645 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 CCDC152Q4G0S7 254 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 MROH7-TTC4A0A0A0MT08 1334 aa24.88■■□□□ 1.57
CCDC38-201ENST00000344280 SARM1Q6SZW1 724 aa24.87■■□□□ 1.57
CCDC38-201ENST00000344280 SGMS1Q86VZ5 419 aa24.87■■□□□ 1.57
CCDC38-201ENST00000344280 MIGA1Q8NAN2 632 aa24.87■■□□□ 1.57
CCDC38-201ENST00000344280 CACTINQ8WUQ7 758 aaKnown RBP24.87■■□□□ 1.57
CCDC38-201ENST00000344280 BECN2A8MW95 431 aa24.87■■□□□ 1.57
CCDC38-201ENST00000344280 CHRNDQ07001 517 aa24.87■■□□□ 1.57
CCDC38-201ENST00000344280 AOPEPQ8N6M6 819 aa24.87■■□□□ 1.57
CCDC38-201ENST00000344280 COL22A1Q8NFW1 1626 aaPredicted RBP24.87■■□□□ 1.57
CCDC38-201ENST00000344280 GOLGA8AA7E2F4 631 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 IGHMBP2P38935 993 aaKnown RBP24.86■■□□□ 1.57
CCDC38-201ENST00000344280 PARP10Q53GL7 1025 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 ZKSCAN3Q9BRR0 538 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 IFIT3O14879 490 aaKnown RBP24.86■■□□□ 1.57
CCDC38-201ENST00000344280 ARID5BQ14865 1188 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 DPCR1Q3MIW9 517 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 PRIMPOLQ96LW4 560 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 KIAA1468Q9P260 1216 aa24.86■■□□□ 1.57
CCDC38-201ENST00000344280 KCNQ2O43526 872 aa24.85■■□□□ 1.57
CCDC38-201ENST00000344280 CDKL5O76039 1030 aa24.85■■□□□ 1.57
CCDC38-201ENST00000344280 ZNF202O95125 648 aa24.85■■□□□ 1.57
CCDC38-201ENST00000344280 RRP12Q5JTH9 1297 aaKnown RBP24.85■■□□□ 1.57
CCDC38-201ENST00000344280 AKNAD1Q5T1N1 836 aa24.85■■□□□ 1.57
CCDC38-201ENST00000344280 SLC4A4Q9Y6R1 1079 aa24.85■■□□□ 1.57
CCDC38-201ENST00000344280 PFKFB1P16118 471 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 CDC25BP30305 580 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 SLC39A14Q15043 492 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 ADGRA1Q86SQ6 560 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 CEP57L1Q8IYX8 460 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 ECM29Q5VYK3 1845 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 IARSP41252 1262 aaKnown RBP24.84■■□□□ 1.57
CCDC38-201ENST00000344280 C3orf67Q6ZVT6 689 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 SLC12A7Q9Y666 1083 aa24.84■■□□□ 1.57
CCDC38-201ENST00000344280 BIN1O00499 593 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 LIFRP42702 1097 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 TDO2P48775 406 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 CDCA7Q9BWT1 371 aaPredicted RBP24.83■■□□□ 1.57
CCDC38-201ENST00000344280 AHDC1Q5TGY3 1603 aaPredicted RBP24.83■■□□□ 1.57
CCDC38-201ENST00000344280 CHD4Q14839 1912 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 SMIM22K7EJ46 135 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 GUCY1A2P33402 732 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 CPLX2Q6PUV4 134 aaKnown RBP24.83■■□□□ 1.57
CCDC38-201ENST00000344280 MFSD6Q6ZSS7 791 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 MRFAP1L1Q96HT8 127 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 SLC26A6Q9BXS9 759 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 TOMM22Q9NS69 142 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 LRP2BPQ9P2M1 347 aa24.83■■□□□ 1.57
CCDC38-201ENST00000344280 CMA1P23946 247 aa24.82■■□□□ 1.56
CCDC38-201ENST00000344280 PTPAQ15257 358 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms