RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 CCHCR1Q8TD31 782 aa15.24■□□□□ 0.03
TRIO-202ENST00000344204 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
TRIO-202ENST00000344204 SEC63Q9UGP8 760 aaKnown RBP15.24■□□□□ 0.03
TRIO-202ENST00000344204 TRIM66O15016 1216 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 TTC19Q6DKK2 380 aaPredicted RBP15.23■□□□□ 0.03
TRIO-202ENST00000344204 UBA7P41226 1012 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 TCP11Q8WWU5 503 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 IRX4P78413 519 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 CDK13Q14004 1512 aaKnown RBP15.23■□□□□ 0.03
TRIO-202ENST00000344204 IARSP41252 1262 aaKnown RBP15.23■□□□□ 0.03
TRIO-202ENST00000344204 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 NOP53Q9NZM5 478 aaKnown RBP15.23■□□□□ 0.03
TRIO-202ENST00000344204 TAF11Q15544 211 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 PPP1R9AQ9ULJ8 1098 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 PDS5BQ9NTI5 1447 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 CHMLP26374 656 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 LONRF3Q496Y0 759 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 MORC4Q8TE76 937 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 SPDL1Q96EA4 605 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 FLOT1O75955 427 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
TRIO-202ENST00000344204 CCDC51Q96ER9 411 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRIO-202ENST00000344204 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
TRIO-202ENST00000344204 HGSO14964 777 aaPredicted RBP15.22■□□□□ 0.03
TRIO-202ENST00000344204 RGS16O15492 202 aaPredicted RBP15.22■□□□□ 0.03
TRIO-202ENST00000344204 POLE2P56282 527 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 KLHL14Q9P2G3 628 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 TDRD7Q8NHU6 1098 aaKnown RBP15.22■□□□□ 0.03
TRIO-202ENST00000344204 KRI1Q8N9T8 703 aaKnown RBP15.22■□□□□ 0.03
TRIO-202ENST00000344204 SPAG5Q96R06 1193 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 DDX23Q9BUQ8 820 aaKnown RBP15.22■□□□□ 0.03
TRIO-202ENST00000344204 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 NBPF14Q5TI25 921 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 SSH2Q76I76 1423 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 EVI5O60447 810 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 PSMD2Q13200 908 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 MLECQ14165 292 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 TCEANC2Q96MN5 208 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 UBA5Q9GZZ9 404 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 DONSONQ9NYP3 566 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 ARID5AQ03989 594 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
TRIO-202ENST00000344204 ALG1Q9BT22 464 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 LRRC2Q9BYS8 371 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 NRBP1Q9UHY1 535 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 AOX1Q06278 1338 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 SLC26A6Q9BXS9 759 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 SLC20A2Q08357 652 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 CALCOCO2Q13137 446 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 CATIPQ7Z7H3 387 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 PPP1R12AO14974 1030 aaPredicted RBP15.21■□□□□ 0.03
TRIO-202ENST00000344204 SUN1O94901 812 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 PKP1Q13835 747 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 ARMC9Q7Z3E5 817 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
TRIO-202ENST00000344204 CREB3L3Q68CJ9 461 aa15.21■□□□□ 0.02
TRIO-202ENST00000344204 NBPF3Q9H094 633 aa15.21■□□□□ 0.02
TRIO-202ENST00000344204 ABCC2Q92887 1545 aa15.21■□□□□ 0.02
TRIO-202ENST00000344204 ANKRD7Q92527 254 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 TMEM51Q9NW97 253 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 ZNF202O95125 648 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 CDC23Q9UJX2 597 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 TSNARE1Q96NA8 513 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 CNNM1Q9NRU3 951 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 CACTINQ8WUQ7 758 aaKnown RBP15.2■□□□□ 0.02
TRIO-202ENST00000344204 TMEM67Q5HYA8 995 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 PPP1R42Q7Z4L9 355 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 NAPBQ9H115 298 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 PPARDQ03181 441 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 LLPHQ9BRT6 129 aaKnown RBP15.2■□□□□ 0.02
TRIO-202ENST00000344204 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.2■□□□□ 0.02
TRIO-202ENST00000344204 STX17P56962 302 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 ALS2CLQ60I27 953 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 PAF1Q8N7H5 531 aa15.2■□□□□ 0.02
TRIO-202ENST00000344204 CTNNA1P35221 906 aaKnown RBP15.19■□□□□ 0.02
TRIO-202ENST00000344204 CFAP157Q5JU67 520 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 MAP3K21Q5TCX8 1036 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 MTUS1Q9ULD2 1270 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 ELF1P32519 619 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 TRAF1Q13077 416 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 PARD6BQ9BYG5 372 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 GCFC2P16383 781 aaKnown RBP15.19■□□□□ 0.02
TRIO-202ENST00000344204 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
TRIO-202ENST00000344204 KDM5CP41229 1560 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 SKIP12755 728 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 PSME1Q06323 249 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 SMC1BQ8NDV3 1235 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 CEP126Q9P2H0 1117 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 F6X3S4 739 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms