RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.176e-7■□□□□ 10.1
SF1-202ENST00000334944 ZCCHC17Q9NP64 241 aaKnown RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 ORC3Q9UBD5 711 aaPredicted RBP16.1■□□□□ 0.17
SF1-202ENST00000334944 BCAMP50895 628 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 SYT10Q6XYQ8 523 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 MAGEB6Q8N7X4 407 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 ZNF274Q96GC6 653 aaPredicted RBP16.09■□□□□ 0.17
SF1-202ENST00000334944 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 MYO5AQ9Y4I1 1855 aaKnown RBP16.09■□□□□ 0.17
SF1-202ENST00000334944 CTDSPL2Q05D32 466 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 ITPK1Q13572 414 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 DDB1Q16531 1140 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
SF1-202ENST00000334944 MICU3Q86XE3 530 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 SALL1Q9NSC2 1324 aa16.09■□□□□ 0.17
SF1-202ENST00000334944 PRKAB2O43741 272 aa16.08■□□□□ 0.17
SF1-202ENST00000334944 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.17
SF1-202ENST00000334944 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.17
SF1-202ENST00000334944 BICDL1Q6ZP65 573 aa16.08■□□□□ 0.17
SF1-202ENST00000334944 PHKBQ93100 1093 aa16.08■□□□□ 0.17
SF1-202ENST00000334944 ARMT1Q9H993 441 aa16.08■□□□□ 0.17
SF1-202ENST00000334944 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.17
SF1-202ENST00000334944 CLIC4Q9Y696 253 aa16.08■□□□□ 0.17
SF1-202ENST00000334944 ST5P78524 1137 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 C8orf76Q96K31 380 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.16
SF1-202ENST00000334944 A0A1B0GVL5 298 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 IL6STP40189 918 aaPredicted RBP16.08■□□□□ 0.16
SF1-202ENST00000334944 ZNF165P49910 485 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 RRP12Q5JTH9 1297 aaKnown RBP16.08■□□□□ 0.16
SF1-202ENST00000334944 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 AIDAQ96BJ3 306 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 ZKSCAN3Q9BRR0 538 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 FBXO3Q9UK99 471 aa16.08■□□□□ 0.16
SF1-202ENST00000334944 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
SF1-202ENST00000334944 NWD2Q9ULI1 1742 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
SF1-202ENST00000334944 PTPN14Q15678 1187 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 KRBA2Q6ZNG9 492 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 FILIP1Q7Z7B0 1213 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 MARCH10Q8NA82 808 aaPredicted RBP16.07■□□□□ 0.16
SF1-202ENST00000334944 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.07■□□□□ 0.16
SF1-202ENST00000334944 MBD4O95243 580 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 TRDNQ13061 729 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 PUM3Q15397 648 aaKnown RBP16.07■□□□□ 0.16
SF1-202ENST00000334944 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
SF1-202ENST00000334944 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
SF1-202ENST00000334944 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.07■□□□□ 0.16
SF1-202ENST00000334944 SLIT2O94813 1529 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 NEDD4P46934 1319 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 SMIM22K7EJ46 135 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 ZNF75DP51815 510 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 SPATA5Q8NB90 893 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 LOC102724428A0A0B4J2F2 783 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 EIF5P55010 431 aaKnown RBP16.06■□□□□ 0.16
SF1-202ENST00000334944 SIK1P57059 783 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 DISP2A7MBM2 1401 aa16.06■□□□□ 0.16
SF1-202ENST00000334944 PIP4K2BP78356 416 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 RCOR1Q9UKL0 485 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 PCDHA7Q9UN72 937 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
SF1-202ENST00000334944 NFXL1Q6ZNB6 911 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 CCDC73Q6ZRK6 1079 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 LPIN2Q92539 896 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
SF1-202ENST00000334944 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
SF1-202ENST00000334944 EPB41L4AQ9HCS5 686 aaPredicted RBP16.05■□□□□ 0.16
SF1-202ENST00000334944 FAM53CQ9NYF3 392 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
SF1-202ENST00000334944 MARCKSP29966 332 aaPredicted RBP16.04■□□□□ 0.16
SF1-202ENST00000334944 CDC27P30260 824 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
SF1-202ENST00000334944 PTF1AQ7RTS3 328 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
SF1-202ENST00000334944 SEC31AO94979 1220 aaKnown RBP16.04■□□□□ 0.16
SF1-202ENST00000334944 PLA2G4AP47712 749 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 CLCN6P51797 869 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 C3orf67Q6ZVT6 689 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
SF1-202ENST00000334944 ABCF2Q9UG63 623 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 FHOD1Q9Y613 1164 aa16.04■□□□□ 0.16
SF1-202ENST00000334944 TCRBV5S4A2TA0A5A2 114 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 ERVV-1B6SEH8 477 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 STK38Q15208 465 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 ISM2Q6H9L7 571 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 ZNF396Q96N95 335 aaPredicted RBP16.03■□□□□ 0.16
SF1-202ENST00000334944 NUP98P52948 1817 aa16.03■□□□□ 0.16
SF1-202ENST00000334944 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms