RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 KIF23Q02241 960 aaPredicted RBP18.68■□□□□ 0.58
UPK3B-202ENST00000334348 RABL6Q3YEC7 729 aaPredicted RBP18.68■□□□□ 0.58
UPK3B-202ENST00000334348 RGS22Q8NE09 1264 aa18.68■□□□□ 0.58
UPK3B-202ENST00000334348 HNRNPLLQ8WVV9 542 aaKnown RBP18.68■□□□□ 0.58
UPK3B-202ENST00000334348 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
UPK3B-202ENST00000334348 DHX58Q96C10 678 aa18.68■□□□□ 0.58
UPK3B-202ENST00000334348 PAG1Q9NWQ8 432 aa18.68■□□□□ 0.58
UPK3B-202ENST00000334348 TRIM66O15016 1216 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 TOGARAM2Q6ZUX3 1019 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 C10orf67Q8IYJ2 551 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 MSL3Q8N5Y2 521 aaKnown RBP18.67■□□□□ 0.58
UPK3B-202ENST00000334348 ANKRD24Q8TF21 1146 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 MYD88Q99836 296 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 GOLIM4O00461 696 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 PPP6R2O75170 966 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 MARCKSP29966 332 aaPredicted RBP18.67■□□□□ 0.58
UPK3B-202ENST00000334348 TC2NQ8N9U0 490 aa18.67■□□□□ 0.58
UPK3B-202ENST00000334348 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 PNOCQ13519 176 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
UPK3B-202ENST00000334348 RRP15Q9Y3B9 282 aaKnown RBP18.66■□□□□ 0.58
UPK3B-202ENST00000334348 IVLP07476 585 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 PTPN21Q16825 1174 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 SHC4Q6S5L8 630 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 JMYQ8N9B5 988 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 HPS5Q9UPZ3 1129 aa18.66■□□□□ 0.58
UPK3B-202ENST00000334348 SPATA31A3Q5VYP0 1347 aa18.65■□□□□ 0.58
UPK3B-202ENST00000334348 SPECC1LQ69YQ0 1117 aa18.65■□□□□ 0.58
UPK3B-202ENST00000334348 PDILTQ8N807 584 aa18.65■□□□□ 0.58
UPK3B-202ENST00000334348 TRPM3Q9HCF6 1732 aaPredicted RBP18.65■□□□□ 0.58
UPK3B-202ENST00000334348 MAST3O60307 1309 aa18.65■□□□□ 0.58
UPK3B-202ENST00000334348 POTEB2H3BUK9 544 aa18.64■□□□□ 0.58
UPK3B-202ENST00000334348 USP5P45974 858 aa18.64■□□□□ 0.58
UPK3B-202ENST00000334348 NOP2P46087 812 aaKnown RBP18.64■□□□□ 0.58
UPK3B-202ENST00000334348 LEKR1Q6ZMV7 388 aa18.64■□□□□ 0.58
UPK3B-202ENST00000334348 SRGAP1Q7Z6B7 1085 aa18.64■□□□□ 0.58
UPK3B-202ENST00000334348 XAGE3Q8WTP9 111 aa18.64■□□□□ 0.58
UPK3B-202ENST00000334348 CCDC12Q8WUD4 166 aaPredicted RBP18.64■□□□□ 0.58
UPK3B-202ENST00000334348 GJB4Q9NTQ9 266 aa18.64■□□□□ 0.58
UPK3B-202ENST00000334348 PHLPP1O60346 1717 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 KLF18A0A0U1RQI7 1052 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 RPS6KA5O75582 802 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 BEND6Q5SZJ8 279 aaPredicted RBP18.64■□□□□ 0.57
UPK3B-202ENST00000334348 CTR9Q6PD62 1173 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 HDXQ7Z353 690 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
UPK3B-202ENST00000334348 RAB21Q9UL25 225 aa18.64■□□□□ 0.57
UPK3B-202ENST00000334348 GOLGA8BA8MQT2 603 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 CPLX1O14810 134 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
UPK3B-202ENST00000334348 CUTAO60888 179 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 RESP18Q5W5W9 173 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 TTLL5Q6EMB2 1281 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 METTL16Q86W50 562 aaKnown RBP18.63■□□□□ 0.57
UPK3B-202ENST00000334348 LTN1O94822 1766 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 ADKP55263 362 aaKnown RBP18.63■□□□□ 0.57
UPK3B-202ENST00000334348 PTPAQ15257 358 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 FOXP4Q8IVH2 680 aaPredicted RBP18.63■□□□□ 0.57
UPK3B-202ENST00000334348 ANKZF1Q9H8Y5 726 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 PDE11AQ9HCR9 933 aa18.63■□□□□ 0.57
UPK3B-202ENST00000334348 MYL6BP14649 208 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 TUBB4BP68371 445 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 PDE4BQ07343 736 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 CCDC102BQ68D86 513 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 ELOA2Q8IYF1 753 aaPredicted RBP18.62■□□□□ 0.57
UPK3B-202ENST00000334348 CEP112Q8N8E3 955 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 PCDHA5Q9Y5H7 936 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 NFAT5O94916 1531 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 COL16A1Q07092 1604 aaPredicted RBP18.62■□□□□ 0.57
UPK3B-202ENST00000334348 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
UPK3B-202ENST00000334348 MSANTD4Q8NCY6 345 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 VPS18Q9P253 973 aa18.62■□□□□ 0.57
UPK3B-202ENST00000334348 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 PRC1O43663 620 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 EIF3JO75822 258 aaKnown RBP18.61■□□□□ 0.57
UPK3B-202ENST00000334348 ZNF18P17022 549 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 BMP6P22004 513 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 KARSQ15046 597 aaKnown RBP18.61■□□□□ 0.57
UPK3B-202ENST00000334348 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
UPK3B-202ENST00000334348 ERLIN1O75477 346 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 CCDC175P0C221 793 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 CDC27P30260 824 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 TUBB2AQ13885 445 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 LONRF3Q496Y0 759 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 ANKRD13DQ6ZTN6 518 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 CNNM3Q8NE01 707 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 DESI2Q9BSY9 194 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 TUBB2BQ9BVA1 445 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 MRPL44Q9H9J2 332 aaKnown RBP18.61■□□□□ 0.57
UPK3B-202ENST00000334348 GPR108Q9NPR9 543 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 CDC23Q9UJX2 597 aa18.61■□□□□ 0.57
UPK3B-202ENST00000334348 M0R2C6 588 aa18.6■□□□□ 0.57
UPK3B-202ENST00000334348 MCM6Q14566 821 aa18.6■□□□□ 0.57
UPK3B-202ENST00000334348 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
UPK3B-202ENST00000334348 MB21D2Q8IYB1 491 aaPredicted RBP18.6■□□□□ 0.57
UPK3B-202ENST00000334348 NEUROD6Q96NK8 337 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms