RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 VWA3AA6NCI4 1184 aa27.18■■□□□ 1.94
TSKU-201ENST00000333090 HSPA2P54652 639 aa27.18■■□□□ 1.94
TSKU-201ENST00000333090 NBPF26B4DH59 902 aa27.18■■□□□ 1.94
TSKU-201ENST00000333090 CABP4P57796 275 aa27.18■■□□□ 1.94
TSKU-201ENST00000333090 NBPF14Q5TI25 921 aa27.18■■□□□ 1.94
TSKU-201ENST00000333090 NBPF10Q6P3W6 841 aaKnown RBP27.18■■□□□ 1.94
TSKU-201ENST00000333090 NBPF15Q8N660 670 aa27.18■■□□□ 1.94
TSKU-201ENST00000333090 ARHGAP6O43182 974 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 KRT40Q6A162 431 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 PDILTQ8N807 584 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 DENND2AQ9ULE3 1009 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 PPP6R2O75170 966 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 ZFYP08048 801 aaPredicted RBP27.17■■□□□ 1.94
TSKU-201ENST00000333090 METTL16Q86W50 562 aaKnown RBP27.17■■□□□ 1.94
TSKU-201ENST00000333090 ZBTB3Q9H5J0 574 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 NWD2Q9ULI1 1742 aa27.17■■□□□ 1.94
TSKU-201ENST00000333090 ADAMTSL3P82987 1691 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 GNG11P61952 73 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 SCARF1Q14162 830 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 PTPAQ15257 358 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 LONRF3Q496Y0 759 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 TMEM139Q8IV31 216 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.16■■□□□ 1.94
TSKU-201ENST00000333090 PHKBQ93100 1093 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 METAP2P50579 478 aaKnown RBP eCLIP27.16■■□□□ 1.94
TSKU-201ENST00000333090 FCHSD1Q86WN1 690 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 CNNM3Q8NE01 707 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 XAGE2Q96GT9 111 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 INTS13Q9NVM9 706 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 PCDHA5Q9Y5H7 936 aa27.16■■□□□ 1.94
TSKU-201ENST00000333090 TPM1P09493 284 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 TEX35Q5T0J7 233 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 PI16Q6UXB8 463 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 FOXP4Q8IVH2 680 aaPredicted RBP27.15■■□□□ 1.94
TSKU-201ENST00000333090 APPBP2Q92624 585 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 WDR24Q96S15 920 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.15■■□□□ 1.94
TSKU-201ENST00000333090 GPAA1O43292 621 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 ZAP70P43403 619 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 IRX5P78411 483 aaPredicted RBP27.15■■□□□ 1.94
TSKU-201ENST00000333090 TRDNQ13061 729 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 CCDC102BQ68D86 513 aa27.15■■□□□ 1.94
TSKU-201ENST00000333090 BAG1Q99933 345 aaPredicted RBP27.15■■□□□ 1.94
TSKU-201ENST00000333090 CIAO1O76071 339 aa27.14■■□□□ 1.94
TSKU-201ENST00000333090 CASQ1P31415 396 aa27.14■■□□□ 1.94
TSKU-201ENST00000333090 RESP18Q5W5W9 173 aa27.14■■□□□ 1.94
TSKU-201ENST00000333090 MPHOSPH8Q99549 860 aa27.14■■□□□ 1.94
TSKU-201ENST00000333090 TMEM51Q9NW97 253 aa27.14■■□□□ 1.94
TSKU-201ENST00000333090 CDC27P30260 824 aa27.14■■□□□ 1.93
TSKU-201ENST00000333090 PDE4BQ07343 736 aa27.14■■□□□ 1.93
TSKU-201ENST00000333090 ZMYM6O95789 1325 aa27.14■■□□□ 1.93
TSKU-201ENST00000333090 KCNH3Q9ULD8 1083 aa27.13■■□□□ 1.93
TSKU-201ENST00000333090 ANGEL1Q9UNK9 670 aaKnown RBP27.13■■□□□ 1.93
TSKU-201ENST00000333090 HNRNPH2P55795 449 aaKnown RBP27.13■■□□□ 1.93
TSKU-201ENST00000333090 MICU3Q86XE3 530 aa27.13■■□□□ 1.93
TSKU-201ENST00000333090 CCDC85AQ96PX6 553 aaPredicted RBP27.13■■□□□ 1.93
TSKU-201ENST00000333090 MAP3K14Q99558 947 aa27.13■■□□□ 1.93
TSKU-201ENST00000333090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.13■■□□□ 1.93
TSKU-201ENST00000333090 FOXN1O15353 648 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 SASH3O75995 380 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 KRBA2Q6ZNG9 492 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 BBXQ8WY36 941 aaPredicted RBP27.12■■□□□ 1.93
TSKU-201ENST00000333090 CPDO75976 1380 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 MST1RQ04912 1400 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 BMP6P22004 513 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 SPECC1Q5M775 1068 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 NKX2-3Q8TAU0 364 aa27.12■■□□□ 1.93
TSKU-201ENST00000333090 ADKP55263 362 aaKnown RBP27.11■■□□□ 1.93
TSKU-201ENST00000333090 CCDC57Q2TAC2 916 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 CDKL5O76039 1030 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 TBC1D8O95759 1140 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 PPP2R3AQ06190 1150 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 CC2D1AQ6P1N0 951 aaPredicted RBP27.11■■□□□ 1.93
TSKU-201ENST00000333090 TOGARAM2Q6ZUX3 1019 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 NEK11Q8NG66 645 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 CCDC34Q96HJ3 373 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 SPEF2Q9C093 1822 aa27.11■■□□□ 1.93
TSKU-201ENST00000333090 ZCCHC17Q9NP64 241 aaKnown RBP27.1■■□□□ 1.93
TSKU-201ENST00000333090 CDK11BP21127 795 aaKnown RBP27.1■■□□□ 1.93
TSKU-201ENST00000333090 MAP3K9P80192 1104 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 CPLX2Q6PUV4 134 aaKnown RBP27.1■■□□□ 1.93
TSKU-201ENST00000333090 CYB5R4Q7L1T6 521 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 CCDC191Q8NCU4 936 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 TRERF1Q96PN7 1200 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 FAM237AA0A1B0GTK4 181 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 MYO1BO43795 1136 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 A1BGP04217 495 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 GPR161Q8N6U8 529 aaKnown RBP27.1■■□□□ 1.93
TSKU-201ENST00000333090 NBPF3Q9H094 633 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 SENP2Q9HC62 589 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 ATG3Q9NT62 314 aa27.1■■□□□ 1.93
TSKU-201ENST00000333090 CUTAO60888 179 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 TRIM29Q14134 588 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 AKAP2Q9Y2D5 859 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 WDR19Q8NEZ3 1342 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 GOLGA6L9A6NEM1 432 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 OAS2P29728 719 aaKnown RBP27.09■■□□□ 1.93
TSKU-201ENST00000333090 APOA5Q6Q788 366 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 TBC1D10CQ8IV04 446 aa27.09■■□□□ 1.93
TSKU-201ENST00000333090 MRFAP1Q9Y605 127 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms