RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TAOK1Q7L7X3 1001 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 ARHGAP24Q8N264 748 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 KRT15P19012 456 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 TNFAIP3P21580 790 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 PSMB7Q99436 277 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 EFCC1Q9HA90 598 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 GSTA1P08263 222 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 GSTA2P09210 222 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 SYF2O95926 243 aaKnown RBP18.3■□□□□ 0.52
PTCH1-201ENST00000331920 DTHD1Q6ZMT9 781 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 UBL4BQ8N7F7 174 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 BRF1Q92994 677 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 RIOK1Q9BRS2 568 aaKnown RBP18.3■□□□□ 0.52
PTCH1-201ENST00000331920 GOLGA6CA6NDK9 693 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 GOLGA6DP0CG33 693 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 MRPS27Q92552 414 aaKnown RBP18.3■□□□□ 0.52
PTCH1-201ENST00000331920 GOLGA6AQ9NYA3 693 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 SUFUQ9UMX1 484 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 SPAG1Q07617 926 aa18.3■□□□□ 0.52
PTCH1-201ENST00000331920 ACTN4O43707 911 aaKnown RBP18.29■□□□□ 0.52
PTCH1-201ENST00000331920 RXRAP19793 462 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 RBSNQ9H1K0 784 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 ITKQ08881 620 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
PTCH1-201ENST00000331920 APOEP02649 317 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 SCYL1Q96KG9 808 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 GPHNQ9NQX3 736 aaPredicted RBP18.29■□□□□ 0.52
PTCH1-201ENST00000331920 ZNF408Q9H9D4 720 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 DACT1Q9NYF0 836 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 KRT19P08727 400 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 JADE1Q6IE81 842 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 C8orf74Q6P047 294 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 WHAMMP3Q1A5X7 153 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 HAUS2Q9NVX0 235 aa18.29■□□□□ 0.52
PTCH1-201ENST00000331920 VGLL3A8MV65 326 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 DDX39AO00148 427 aaKnown RBP18.28■□□□□ 0.52
PTCH1-201ENST00000331920 OLA1Q9NTK5 396 aaKnown RBP18.28■□□□□ 0.52
PTCH1-201ENST00000331920 DNM1Q05193 864 aaKnown RBP18.28■□□□□ 0.52
PTCH1-201ENST00000331920 LIN9Q5TKA1 542 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 RNF217Q8TC41 542 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 NUB1Q9Y5A7 615 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 PPP4R1Q8TF05 950 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 TRAF5O00463 557 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 BAG5Q9UL15 447 aa18.28■□□□□ 0.52
PTCH1-201ENST00000331920 TRIM56Q9BRZ2 755 aaKnown RBP18.28■□□□□ 0.52
PTCH1-201ENST00000331920 HNRNPCL2B2RXH8 293 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 HNRNPCL1O60812 293 aaKnown RBP18.27■□□□□ 0.52
PTCH1-201ENST00000331920 BMP15O95972 392 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 KIF22Q14807 665 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 ANKRD35Q8N283 1001 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 RIMBP2O15034 1052 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 ATP2A3Q93084 1043 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 ZC4H2Q9NQZ6 224 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 CAVIN2O95810 425 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 STRN3Q13033 797 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 DBN1Q16643 649 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 HAUS8Q9BT25 410 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.52
PTCH1-201ENST00000331920 CSPG5O95196 566 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 NOC4LQ9BVI4 516 aaKnown RBP18.27■□□□□ 0.52
PTCH1-201ENST00000331920 MAPK8IP1Q9UQF2 711 aa18.27■□□□□ 0.52
PTCH1-201ENST00000331920 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.51
PTCH1-201ENST00000331920 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.51
PTCH1-201ENST00000331920 CCNT1O60563 726 aaKnown RBP18.27■□□□□ 0.51
PTCH1-201ENST00000331920 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.27■□□□□ 0.51
PTCH1-201ENST00000331920 FAM200AQ8TCP9 573 aa18.27■□□□□ 0.51
PTCH1-201ENST00000331920 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.51
PTCH1-201ENST00000331920 BAIAP2L1Q9UHR4 511 aa18.27■□□□□ 0.51
PTCH1-201ENST00000331920 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 BEND3Q5T5X7 828 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 FAF1Q9UNN5 650 aaPredicted RBP18.26■□□□□ 0.51
PTCH1-201ENST00000331920 LPXNO60711 386 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 IFRD2Q12894 506 aaPredicted RBP18.26■□□□□ 0.51
PTCH1-201ENST00000331920 ASIC2Q16515 512 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 ECHDC1Q9NTX5 307 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 NAIPQ13075 1403 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 NOP56O00567 594 aaKnown RBP18.26■□□□□ 0.51
PTCH1-201ENST00000331920 SERPINB6P35237 376 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 PEX19P40855 299 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
PTCH1-201ENST00000331920 MICAL1Q8TDZ2 1067 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 VWA3AA6NCI4 1184 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 OATP04181 439 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 EVCP57679 992 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 ANKRD42Q8N9B4 389 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 CNNM2Q9H8M5 875 aa18.26■□□□□ 0.51
PTCH1-201ENST00000331920 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
PTCH1-201ENST00000331920 ANKLE2Q86XL3 938 aa18.25■□□□□ 0.51
PTCH1-201ENST00000331920 SDCCAG3Q96C92 435 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms