RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KAT6BQ8WYB5 2073 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 MYO5AQ9Y4I1 1855 aaKnown RBP25.99■■□□□ 1.75
PNKP-201ENST00000322344 LAMB2P55268 1798 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 PHLPP1O60346 1717 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 TIAM2Q8IVF5 1701 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 PNPLA7Q6ZV29 1317 aa25.99■■□□□ 1.75
PNKP-201ENST00000322344 DENND2AQ9ULE3 1009 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 PTGS1P23219 599 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 NFXL1Q6ZNB6 911 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 CEP57L1Q8IYX8 460 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 NACAP1Q9BZK3 213 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 LY9Q9HBG7 655 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 EPB41L4AQ9HCS5 686 aaPredicted RBP25.98■■□□□ 1.75
PNKP-201ENST00000322344 PYCARDQ9ULZ3 195 aa25.98■■□□□ 1.75
PNKP-201ENST00000322344 KIF28PB7ZC32 967 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 TMEM67Q5HYA8 995 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 SDF4Q9BRK5 362 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 NIP7Q9Y221 180 aaKnown RBP eCLIP25.97■■□□□ 1.75
PNKP-201ENST00000322344 ZNF652Q9Y2D9 606 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 FAM177BA6PVY3 158 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 BECN2A8MW95 431 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 CCDC186Q7Z3E2 898 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 MRFAP1L1Q96HT8 127 aa25.97■■□□□ 1.75
PNKP-201ENST00000322344 STK36Q9NRP7 1315 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 A0A1B0GVL5 298 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 GOLGA8AA7E2F4 631 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 NDUFA8P51970 172 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 ITPK1Q13572 414 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 AKNAD1Q5T1N1 836 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 MARCH10Q8NA82 808 aaPredicted RBP25.96■■□□□ 1.75
PNKP-201ENST00000322344 SMARCC1Q92922 1105 aaPredicted RBP25.96■■□□□ 1.75
PNKP-201ENST00000322344 MTA3Q9BTC8 594 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 ARMT1Q9H993 441 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 NID2Q14112 1375 aa25.96■■□□□ 1.75
PNKP-201ENST00000322344 A0A0G2JS52 829 aa25.95■■□□□ 1.75
PNKP-201ENST00000322344 IARSP41252 1262 aaKnown RBP25.95■■□□□ 1.75
PNKP-201ENST00000322344 C17orf53Q8N3J3 647 aaPredicted RBP25.95■■□□□ 1.75
PNKP-201ENST00000322344 MYRIPQ8NFW9 859 aa25.95■■□□□ 1.75
PNKP-201ENST00000322344 ACSBG1Q96GR2 724 aa25.95■■□□□ 1.75
PNKP-201ENST00000322344 CDC5LQ99459 802 aaKnown RBP25.95■■□□□ 1.75
PNKP-201ENST00000322344 CLIP2Q9UDT6 1046 aa25.95■■□□□ 1.75
PNKP-201ENST00000322344 GSG1L2A8MUP6 293 aa25.95■■□□□ 1.74
PNKP-201ENST00000322344 CMA1P23946 247 aa25.95■■□□□ 1.74
PNKP-201ENST00000322344 CDC27P30260 824 aa25.95■■□□□ 1.74
PNKP-201ENST00000322344 KRT40Q6A162 431 aa25.95■■□□□ 1.74
PNKP-201ENST00000322344 MICU3Q86XE3 530 aa25.95■■□□□ 1.74
PNKP-201ENST00000322344 NKX2-3Q8TAU0 364 aa25.95■■□□□ 1.74
PNKP-201ENST00000322344 TRIM29Q14134 588 aa25.94■■□□□ 1.74
PNKP-201ENST00000322344 SLC39A14Q15043 492 aa25.94■■□□□ 1.74
PNKP-201ENST00000322344 NTRK3Q16288 839 aa25.94■■□□□ 1.74
PNKP-201ENST00000322344 GJB4Q9NTQ9 266 aa25.94■■□□□ 1.74
PNKP-201ENST00000322344 SLC12A7Q9Y666 1083 aa25.94■■□□□ 1.74
PNKP-201ENST00000322344 CCDC69A6NI79 296 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 IFIT3O14879 490 aaKnown RBP25.93■■□□□ 1.74
PNKP-201ENST00000322344 MFSD6Q6ZSS7 791 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 JMYQ8N9B5 988 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 STAG1Q8WVM7 1258 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 BCAMP50895 628 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 CHRNDQ07001 517 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 ZRSR1Q15695 479 aaKnown RBP25.93■■□□□ 1.74
PNKP-201ENST00000322344 AXDND1Q5T1B0 1012 aaPredicted RBP25.93■■□□□ 1.74
PNKP-201ENST00000322344 VPS37DQ86XT2 251 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 DHX40Q8IX18 779 aaKnown RBP25.93■■□□□ 1.74
PNKP-201ENST00000322344 WASF1Q92558 559 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 ZSWIM5Q9P217 1185 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 KIAA1468Q9P260 1216 aa25.93■■□□□ 1.74
PNKP-201ENST00000322344 PPP6R2O75170 966 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 CTDSPL2Q05D32 466 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 CLEC4GQ6UXB4 293 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 BPIFA3Q9BQP9 254 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 SENP2Q9HC62 589 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 SPATA31A5Q5VU36 1347 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 SPATA31A7Q8IWB4 1347 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 SNAP23O00161 211 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 ADAMTS2O95450 1211 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 TDO2P48775 406 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 GNL2Q13823 731 aaKnown RBP25.92■■□□□ 1.74
PNKP-201ENST00000322344 SART3Q15020 963 aaKnown RBP25.92■■□□□ 1.74
PNKP-201ENST00000322344 BARGINQ6ZT62 677 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 FAM217BQ9NTX9 383 aaPredicted RBP25.92■■□□□ 1.74
PNKP-201ENST00000322344 SLC4A4Q9Y6R1 1079 aa25.92■■□□□ 1.74
PNKP-201ENST00000322344 SSRP1Q08945 709 aaKnown RBP25.91■■□□□ 1.74
PNKP-201ENST00000322344 TIGD1Q96MW7 591 aa25.91■■□□□ 1.74
PNKP-201ENST00000322344 MAP7D2Q96T17 732 aa25.91■■□□□ 1.74
PNKP-201ENST00000322344 RNF41Q9H4P4 317 aaPredicted RBP25.91■■□□□ 1.74
PNKP-201ENST00000322344 NEMFO60524 1076 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 RXRAP19793 462 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 U2AF2P26368 475 aaKnown RBP eCLIP25.9■■□□□ 1.744e-8■□□□□ 9.6
PNKP-201ENST00000322344 LCORLQ8N3X6 602 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 PHKBQ93100 1093 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 AIFM3Q96NN9 605 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 LRP2BPQ9P2M1 347 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 BCL9LQ86UU0 1499 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 ZNF202O95125 648 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 FMNL1O95466 1100 aaPredicted RBP25.9■■□□□ 1.74
PNKP-201ENST00000322344 RCAN1P53805 252 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 TMTC2Q8N394 836 aa25.9■■□□□ 1.74
PNKP-201ENST00000322344 IFNAR1P17181 557 aa25.89■■□□□ 1.74
PNKP-201ENST00000322344 RBM6P78332 1123 aaKnown RBP25.89■■□□□ 1.74
PNKP-201ENST00000322344 PDCL3Q9H2J4 239 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms