RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 COPRSQ9NQ92 184 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 ZBTB1Q9Y2K1 713 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 CRB1P82279 1406 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 ADCY9O60503 1353 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 HAUS7Q99871 368 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 TEX13AQ9BXU3 409 aaPredicted RBP17.42■□□□□ 0.38
VARS2-201ENST00000321897 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 ZNF444Q8N0Y2 327 aaPredicted RBP17.42■□□□□ 0.38
VARS2-201ENST00000321897 NUP88Q99567 741 aaPredicted RBP17.42■□□□□ 0.38
VARS2-201ENST00000321897 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
VARS2-201ENST00000321897 M0R2C6 588 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 ZNF202O95125 648 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 TCIRG1Q13488 830 aa17.42■□□□□ 0.38
VARS2-201ENST00000321897 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
VARS2-201ENST00000321897 CCDC194A0A1B0GVG4 234 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 ANKRD65E5RJM6 399 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 KRT40Q6A162 431 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
VARS2-201ENST00000321897 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 EPS15P42566 896 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
VARS2-201ENST00000321897 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.41■□□□□ 0.38
VARS2-201ENST00000321897 MAST3O60307 1309 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 MCM7P33993 719 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 GYG1P46976 350 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
VARS2-201ENST00000321897 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
VARS2-201ENST00000321897 MED14O60244 1454 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
VARS2-201ENST00000321897 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 PDIA3P30101 505 aaKnown RBP17.4■□□□□ 0.38
VARS2-201ENST00000321897 MATR3P43243 847 aaKnown RBP eCLIP17.4■□□□□ 0.38
VARS2-201ENST00000321897 RNF41Q9H4P4 317 aaPredicted RBP17.4■□□□□ 0.38
VARS2-201ENST00000321897 MCM9Q9NXL9 1143 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 CAVIN2O95810 425 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 ZSCAN26Q16670 478 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 GYS2P54840 703 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 PNOCQ13519 176 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 FKBP15Q5T1M5 1219 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
VARS2-201ENST00000321897 DACH1Q9UI36 760 aa17.4■□□□□ 0.38
VARS2-201ENST00000321897 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
VARS2-201ENST00000321897 NDUFA8P51970 172 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 LRRC8AQ8IWT6 810 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 PCDHA7Q9UN72 937 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 N4BP3O15049 544 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 PRKAB2O43741 272 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 CCT6AP40227 531 aaKnown RBP17.39■□□□□ 0.37
VARS2-201ENST00000321897 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 TERF2Q15554 542 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 ESR2Q92731 530 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 VPS54Q9P1Q0 977 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 HNRNPH2P55795 449 aaKnown RBP17.39■□□□□ 0.37
VARS2-201ENST00000321897 PICALMQ13492 652 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.37
VARS2-201ENST00000321897 LONRF3Q496Y0 759 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 GDAP1L1Q96MZ0 367 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 PLCD4Q9BRC7 762 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 MROH2AA6NES4 1674 aa17.39■□□□□ 0.37
VARS2-201ENST00000321897 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 ARAP3Q8WWN8 1544 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 BTBD18B2RXH4 712 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 DDIT3P35638 169 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 EIF6P56537 245 aaKnown RBP17.38■□□□□ 0.37
VARS2-201ENST00000321897 RNF187Q5TA31 235 aaPredicted RBP17.38■□□□□ 0.37
VARS2-201ENST00000321897 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 XPO4Q9C0E2 1151 aaKnown RBP17.38■□□□□ 0.37
VARS2-201ENST00000321897 MAGEB6P1A0A0J9YX57 407 aa17.38■□□□□ 0.37
VARS2-201ENST00000321897 NSUN7Q8NE18 718 aaKnown RBP17.38■□□□□ 0.37
VARS2-201ENST00000321897 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
VARS2-201ENST00000321897 SAP30BPQ9UHR5 308 aaKnown RBP17.38■□□□□ 0.37
VARS2-201ENST00000321897 UBA7P41226 1012 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 HLFQ16534 295 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 RRAGBQ5VZM2 374 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 CEP131Q9UPN4 1083 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 LAMC1P11047 1609 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
VARS2-201ENST00000321897 TTC31Q49AM3 519 aaPredicted RBP17.37■□□□□ 0.37
VARS2-201ENST00000321897 USP27XA6NNY8 438 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 TTC14Q96N46 770 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 KCNF1Q9H3M0 494 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 SCARF1Q14162 830 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 KIAA1328Q86T90 577 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
VARS2-201ENST00000321897 ZCCHC17Q9NP64 241 aaKnown RBP17.37■□□□□ 0.37
VARS2-201ENST00000321897 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 CDR1P51861 262 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 COL9A3Q14050 684 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms