RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 MFSD6Q6ZSS7 791 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 ZNF274Q96GC6 653 aaPredicted RBP18.67■□□□□ 0.58
SHISA2-201ENST00000319420 AGXT2Q9BYV1 514 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 NACAP1Q9BZK3 213 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 BCL11BQ9C0K0 894 aaPredicted RBP18.67■□□□□ 0.58
SHISA2-201ENST00000319420 HIBADHP31937 336 aaKnown RBP18.67■□□□□ 0.58
SHISA2-201ENST00000319420 CKAP2LQ8IYA6 745 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 ANGEL1Q9UNK9 670 aaKnown RBP18.67■□□□□ 0.58
SHISA2-201ENST00000319420 LEO1Q8WVC0 666 aaPredicted RBP18.67■□□□□ 0.58
SHISA2-201ENST00000319420 ZNF804BA4D1E1 1349 aa18.67■□□□□ 0.58
SHISA2-201ENST00000319420 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
SHISA2-201ENST00000319420 RESTQ13127 1097 aa18.66■□□□□ 0.58
SHISA2-201ENST00000319420 SLC10A5Q5PT55 438 aa18.66■□□□□ 0.58
SHISA2-201ENST00000319420 NUP133Q8WUM0 1156 aa18.66■□□□□ 0.58
SHISA2-201ENST00000319420 COL1A1P02452 1464 aaPredicted RBP18.66■□□□□ 0.58
SHISA2-201ENST00000319420 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
SHISA2-201ENST00000319420 RTL9Q8NET4 1388 aa18.66■□□□□ 0.58
SHISA2-201ENST00000319420 ZNF384Q8TF68 577 aa18.66■□□□□ 0.58
SHISA2-201ENST00000319420 TM4SF1P30408 202 aa18.65■□□□□ 0.58
SHISA2-201ENST00000319420 HMGN5P82970 282 aaKnown RBP18.65■□□□□ 0.58
SHISA2-201ENST00000319420 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
SHISA2-201ENST00000319420 RPGRQ92834 1020 aaKnown RBP18.65■□□□□ 0.58
SHISA2-201ENST00000319420 CSPP1Q1MSJ5 1256 aa18.65■□□□□ 0.58
SHISA2-201ENST00000319420 PRR5LQ6MZQ0 368 aa18.65■□□□□ 0.58
SHISA2-201ENST00000319420 C8orf76Q96K31 380 aa18.65■□□□□ 0.58
SHISA2-201ENST00000319420 A0A0U1RQG5 324 aaPredicted RBP18.64■□□□□ 0.58
SHISA2-201ENST00000319420 CDC27P30260 824 aa18.64■□□□□ 0.58
SHISA2-201ENST00000319420 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.58
SHISA2-201ENST00000319420 DACT1Q9NYF0 836 aa18.64■□□□□ 0.58
SHISA2-201ENST00000319420 MECOMQ03112 1051 aa18.64■□□□□ 0.57
SHISA2-201ENST00000319420 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
SHISA2-201ENST00000319420 GYS1P13807 737 aa18.64■□□□□ 0.57
SHISA2-201ENST00000319420 APOA5Q6Q788 366 aa18.64■□□□□ 0.57
SHISA2-201ENST00000319420 TICAM2Q86XR7 235 aa18.64■□□□□ 0.57
SHISA2-201ENST00000319420 USP28Q96RU2 1077 aa18.64■□□□□ 0.57
SHISA2-201ENST00000319420 COL5A3P25940 1745 aaPredicted RBP18.63■□□□□ 0.57
SHISA2-201ENST00000319420 SH2B2O14492 632 aaPredicted RBP18.63■□□□□ 0.57
SHISA2-201ENST00000319420 RANBP6O60518 1105 aaKnown RBP18.63■□□□□ 0.57
SHISA2-201ENST00000319420 SERPINB2P05120 415 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 KIF3AQ9Y496 699 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 CCDC69A6NI79 296 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 ZBTB43O43298 467 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 PGBD1Q96JS3 809 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 PDLIM2Q96JY6 352 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 SCAND2PQ9GZW5 306 aaPredicted RBP18.63■□□□□ 0.57
SHISA2-201ENST00000319420 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
SHISA2-201ENST00000319420 GOLGA8AA7E2F4 631 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 CLCN1P35523 988 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 PPARAQ07869 468 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 SRCAPQ6ZRS2 3230 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 DIXDC1Q155Q3 683 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 MSL1Q68DK7 614 aa18.62■□□□□ 0.57
SHISA2-201ENST00000319420 DHX16O60231 1041 aaKnown RBP18.61■□□□□ 0.57
SHISA2-201ENST00000319420 NR1I2O75469 434 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 OLFM4Q6UX06 510 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 DZIP1Q86YF9 867 aaKnown RBP18.61■□□□□ 0.57
SHISA2-201ENST00000319420 IGDCC4Q8TDY8 1250 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 LY9Q9HBG7 655 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 LRP5O75197 1615 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 USP17L12C9JPN9 530 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 USP17L21D6R901 530 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 ME1P48163 572 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 GRIK5Q16478 980 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 FBXO33Q7Z6M2 555 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 ERCC4Q92889 916 aaPredicted RBP18.61■□□□□ 0.57
SHISA2-201ENST00000319420 SLC26A6Q9BXS9 759 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 MTMR7Q9Y216 660 aa18.61■□□□□ 0.57
SHISA2-201ENST00000319420 CYP2D6P10635 497 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 GNL2Q13823 731 aaKnown RBP18.6■□□□□ 0.57
SHISA2-201ENST00000319420 PROM2Q8N271 834 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 PIBF1Q8WXW3 757 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 ANKRD2Q9GZV1 360 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 A0A087WWV3 80 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
SHISA2-201ENST00000319420 TXNRD1Q16881 649 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 NSUN4Q96CB9 384 aaKnown RBP18.6■□□□□ 0.57
SHISA2-201ENST00000319420 MYH7P12883 1935 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 ATRNO75882 1429 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 SALL1Q9NSC2 1324 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 UFL1O94874 794 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 ILDR1Q86SU0 546 aaPredicted RBP18.6■□□□□ 0.57
SHISA2-201ENST00000319420 RIOK1Q9BRS2 568 aaKnown RBP18.6■□□□□ 0.57
SHISA2-201ENST00000319420 UBAC1Q9BSL1 405 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
SHISA2-201ENST00000319420 GRAPQ13588 217 aa18.59■□□□□ 0.57
SHISA2-201ENST00000319420 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
SHISA2-201ENST00000319420 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
SHISA2-201ENST00000319420 ERICH2A1L162 156 aa18.59■□□□□ 0.57
SHISA2-201ENST00000319420 APBA3O96018 575 aa18.59■□□□□ 0.57
SHISA2-201ENST00000319420 GNAT2P19087 354 aa18.59■□□□□ 0.57
SHISA2-201ENST00000319420 WTAPQ15007 396 aa18.59■□□□□ 0.57
SHISA2-201ENST00000319420 C6orf229H3BNL8 230 aa18.58■□□□□ 0.57
SHISA2-201ENST00000319420 NMT2O60551 498 aa18.58■□□□□ 0.57
SHISA2-201ENST00000319420 DDR1Q08345 913 aa18.58■□□□□ 0.57
SHISA2-201ENST00000319420 FAM47AQ5JRC9 791 aa18.58■□□□□ 0.57
SHISA2-201ENST00000319420 SYNE3Q6ZMZ3 975 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms