RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 KRT85P78386 507 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 FBXW10Q5XX13 1052 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZBTB40Q9NUA8 1239 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 ADRA2BP18089 450 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 GBP2P32456 591 aaPredicted RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 NAP1L1P55209 391 aaKnown RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 TFIP11Q9UBB9 837 aaKnown RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 TNS1Q9HBL0 1735 aaKnown RBP13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 INPP5BP32019 993 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
LDLRAD3-201ENST00000315571 SDSP20132 328 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 NEDD9Q14511 834 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 STK32BQ9NY57 414 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 A0A1B0GUA9 196 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 GRM8O00222 908 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 GNAI2P04899 355 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 GCKRQ14397 625 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 USPL1Q5W0Q7 1092 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 TMC6Q7Z403 805 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 TRIM6Q9C030 488 aaPredicted RBP13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 SRP68Q9UHB9 627 aaKnown RBP13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 NARFQ9UHQ1 456 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 FAN1Q9Y2M0 1017 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 H2AFXP16104 143 aaPredicted RBP13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 NUCKS1Q9H1E3 243 aaKnown RBP13.41□□□□□ -0.26
LDLRAD3-201ENST00000315571 MYH14Q7Z406 1995 aaKnown RBP13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 GNG11P61952 73 aa13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 RNF187Q5TA31 235 aaPredicted RBP13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 NAT10Q9H0A0 1025 aaKnown RBP13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 ODF2LQ9ULJ1 636 aa13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 CAPN7Q9Y6W3 813 aa13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.26
LDLRAD3-201ENST00000315571 HMMRO75330 724 aa13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 CORO7P57737 925 aa13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 TTC22Q5TAA0 569 aa13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 AMIGO3Q86WK7 504 aa13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 PDILTQ8N807 584 aa13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.27
LDLRAD3-201ENST00000315571 ELP1O95163 1332 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 RREB1Q92766 1687 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 CAND2O75155 1236 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 TRDNQ13061 729 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 NBPF7P0C2Y1 421 aaPredicted RBP13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 PAX7P23759 505 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 UBE3BQ7Z3V4 1068 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 CNNM3Q8NE01 707 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 SPATA32Q96LK8 384 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 CCP110O43303 1012 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
LDLRAD3-201ENST00000315571 PSMD2Q13200 908 aa13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 F13A1P00488 732 aa13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 GSPT1P15170 499 aaKnown RBP13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 CCT5P48643 541 aa13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 GSDMDP57764 484 aa13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
LDLRAD3-201ENST00000315571 HNRNPH1P31943 449 aaKnown RBP13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 CC2D1AQ6P1N0 951 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 ERCC4Q92889 916 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 LRRCC1Q9C099 1032 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 TRMT112Q9UI30 125 aaKnown RBP13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 SYT1P21579 422 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 ELF1P32519 619 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
LDLRAD3-201ENST00000315571 OTUD6BQ8N6M0 293 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms