RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RIOK1Q9BRS2 568 aaKnown RBP21.56■■□□□ 1.04
CCDC43-201ENST00000315286 TFIP11Q9UBB9 837 aaKnown RBP21.56■■□□□ 1.04
CCDC43-201ENST00000315286 IGDCC4Q8TDY8 1250 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 SDR42E1Q8WUS8 393 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 ZSWIM5Q9P217 1185 aa21.56■■□□□ 1.04
CCDC43-201ENST00000315286 TMEM87BQ96K49 555 aa21.55■■□□□ 1.04
CCDC43-201ENST00000315286 SENP2Q9HC62 589 aa21.55■■□□□ 1.04
CCDC43-201ENST00000315286 ANKIB1Q9P2G1 1089 aa21.55■■□□□ 1.04
CCDC43-201ENST00000315286 PDS5AQ29RF7 1337 aaKnown RBP21.55■■□□□ 1.04
CCDC43-201ENST00000315286 DHX16O60231 1041 aaKnown RBP21.54■■□□□ 1.04
CCDC43-201ENST00000315286 DYNLL1P63167 89 aaKnown RBP21.54■■□□□ 1.04
CCDC43-201ENST00000315286 MFSD6Q6ZSS7 791 aa21.54■■□□□ 1.04
CCDC43-201ENST00000315286 RBSNQ9H1K0 784 aa21.54■■□□□ 1.04
CCDC43-201ENST00000315286 ZSCAN16Q9H4T2 348 aaPredicted RBP21.54■■□□□ 1.04
CCDC43-201ENST00000315286 KDM4AO75164 1064 aa21.54■■□□□ 1.04
CCDC43-201ENST00000315286 CHAF1AQ13111 956 aaPredicted RBP21.54■■□□□ 1.04
CCDC43-201ENST00000315286 NSUN4Q96CB9 384 aaKnown RBP21.54■■□□□ 1.04
CCDC43-201ENST00000315286 CNNM2Q9H8M5 875 aa21.54■■□□□ 1.04
CCDC43-201ENST00000315286 TIAM2Q8IVF5 1701 aa21.54■■□□□ 1.04
CCDC43-201ENST00000315286 STAG1Q8WVM7 1258 aa21.53■■□□□ 1.04
CCDC43-201ENST00000315286 RPGRQ92834 1020 aaKnown RBP21.53■■□□□ 1.04
CCDC43-201ENST00000315286 SCAND2PQ9GZW5 306 aaPredicted RBP21.53■■□□□ 1.04
CCDC43-201ENST00000315286 ELP1O95163 1332 aa21.53■■□□□ 1.04
CCDC43-201ENST00000315286 ST5P78524 1137 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 MECOMQ03112 1051 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 CRY2Q49AN0 593 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 STK11IPQ8N1F8 1099 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 KRT23Q9C075 422 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 LY9Q9HBG7 655 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 LEMD3Q9Y2U8 911 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 NASPP49321 788 aaPredicted RBP21.52■■□□□ 1.04
CCDC43-201ENST00000315286 RBM6P78332 1123 aaKnown RBP21.52■■□□□ 1.04
CCDC43-201ENST00000315286 GUCY1B3Q02153 619 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 DDR1Q08345 913 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 TMEM67Q5HYA8 995 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 JAG2Q9Y219 1238 aa21.52■■□□□ 1.04
CCDC43-201ENST00000315286 CPLX1O14810 134 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 PPARAQ07869 468 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 RRP12Q5JTH9 1297 aaKnown RBP21.51■■□□□ 1.03
CCDC43-201ENST00000315286 CCDC183Q5T5S1 534 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 APOA5Q6Q788 366 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 LEO1Q8WVC0 666 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-201ENST00000315286 SPATA32Q96LK8 384 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 MINDY4BA8MYZ0 360 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 RXRAP19793 462 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 PRDX5P30044 214 aa21.51■■□□□ 1.03
CCDC43-201ENST00000315286 ORC3Q9UBD5 711 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-201ENST00000315286 XDHP47989 1333 aa21.5■■□□□ 1.03
CCDC43-201ENST00000315286 BAZ2AQ9UIF9 1905 aaKnown RBP21.5■■□□□ 1.03
CCDC43-201ENST00000315286 IFIT3O14879 490 aaKnown RBP21.5■■□□□ 1.03
CCDC43-201ENST00000315286 METAP2P50579 478 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCDC43-201ENST00000315286 SGMS1Q86VZ5 419 aa21.5■■□□□ 1.03
CCDC43-201ENST00000315286 TOMM22Q9NS69 142 aa21.5■■□□□ 1.03
CCDC43-201ENST00000315286 SMIM22K7EJ46 135 aa21.49■■□□□ 1.03
CCDC43-201ENST00000315286 POLRMTO00411 1230 aaKnown RBP21.49■■□□□ 1.03
CCDC43-201ENST00000315286 ADD1P35611 737 aaKnown RBP21.49■■□□□ 1.03
CCDC43-201ENST00000315286 LIFRP42702 1097 aa21.49■■□□□ 1.03
CCDC43-201ENST00000315286 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
CCDC43-201ENST00000315286 MYH15Q9Y2K3 1946 aa21.49■■□□□ 1.03
CCDC43-201ENST00000315286 ZBTB22O15209 634 aa21.49■■□□□ 1.03
CCDC43-201ENST00000315286 ANAPC4Q9UJX5 808 aa21.49■■□□□ 1.03
CCDC43-201ENST00000315286 ZBTB43O43298 467 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 CDC27P30260 824 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 GPSM2P81274 684 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 ZNF772Q68DY9 489 aaPredicted RBP21.48■■□□□ 1.03
CCDC43-201ENST00000315286 MICU3Q86XE3 530 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 RBM17Q96I25 401 aaKnown RBP21.48■■□□□ 1.03
CCDC43-201ENST00000315286 GPR101Q96P66 508 aaPredicted RBP21.48■■□□□ 1.03
CCDC43-201ENST00000315286 BRIP1Q9BX63 1249 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 RNF41Q9H4P4 317 aaPredicted RBP21.48■■□□□ 1.03
CCDC43-201ENST00000315286 CCDC88AQ3V6T2 1871 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 OTUD7BQ6GQQ9 843 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 ZKSCAN3Q9BRR0 538 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 CFAP45Q9UL16 551 aa21.48■■□□□ 1.03
CCDC43-201ENST00000315286 CCDC144CPQ8IYA2 1237 aa21.47■■□□□ 1.03
CCDC43-201ENST00000315286 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
CCDC43-201ENST00000315286 C8orf76Q96K31 380 aa21.47■■□□□ 1.03
CCDC43-201ENST00000315286 MYL10Q9BUA6 226 aa21.47■■□□□ 1.03
CCDC43-201ENST00000315286 AATFQ9NY61 560 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCDC43-201ENST00000315286 CYP2D7A0A087X1C5 515 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 ZNF827Q17R98 1081 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 ILDR1Q86SU0 546 aaPredicted RBP21.46■■□□□ 1.03
CCDC43-201ENST00000315286 TSPY26PQ9H489 355 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 SLC12A7Q9Y666 1083 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 FBXO18Q8NFZ0 1043 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 GJB4Q9NTQ9 266 aa21.46■■□□□ 1.03
CCDC43-201ENST00000315286 FAM217BQ9NTX9 383 aaPredicted RBP21.46■■□□□ 1.03
CCDC43-201ENST00000315286 CCDC69A6NI79 296 aa21.45■■□□□ 1.02
CCDC43-201ENST00000315286 PLSCR1O15162 318 aa21.45■■□□□ 1.02
CCDC43-201ENST00000315286 LETM1O95202 739 aaPredicted RBP21.45■■□□□ 1.02
CCDC43-201ENST00000315286 APBA3O96018 575 aa21.45■■□□□ 1.02
CCDC43-201ENST00000315286 LIG1P18858 919 aa21.45■■□□□ 1.02
CCDC43-201ENST00000315286 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.02
CCDC43-201ENST00000315286 C15orf52Q6ZUT6 534 aaKnown RBP21.45■■□□□ 1.02
CCDC43-201ENST00000315286 GOLGA6L4A6NEF3 574 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 GOLGA8AA7E2F4 631 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 HMGB2P26583 209 aaKnown RBP21.44■■□□□ 1.02
CCDC43-201ENST00000315286 HOXA10P31260 410 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-201ENST00000315286 SART3Q15020 963 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms