RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 KDM4AO75164 1064 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 ATL3Q6DD88 541 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 PPARAQ07869 468 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 MICU3Q86XE3 530 aa18.21■□□□□ 0.51
CGGBP1-201ENST00000309534 TSPY2A6NKD2 308 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 UBE2HP62256 183 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 STK38Q15208 465 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 SMIM5Q71RC9 77 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 PDS5AQ29RF7 1337 aaKnown RBP18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 CHST3Q7LGC8 479 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 FBXO33Q7Z6M2 555 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 MASTLQ96GX5 879 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 KIF5BP33176 963 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 RTN1Q16799 776 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 MCM9Q9NXL9 1143 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 SPEF2Q9C093 1822 aa18.2■□□□□ 0.5
CGGBP1-201ENST00000309534 MMP10P09238 476 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 MTA3Q9BTC8 594 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 TMOD2Q9NZR1 351 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 IFIT1BQ5T764 474 aaKnown RBP18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 ZMYM6O95789 1325 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 TJP1Q07157 1748 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 CLEC17AQ6ZS10 378 aa18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 AATFQ9NY61 560 aaKnown RBP eCLIP18.19■□□□□ 0.5
CGGBP1-201ENST00000309534 GLI3P10071 1580 aa18.18■□□□□ 0.5
CGGBP1-201ENST00000309534 SNAP23O00161 211 aa18.18■□□□□ 0.5
CGGBP1-201ENST00000309534 RBM5P52756 815 aaKnown RBP eCLIP18.18■□□□□ 0.5
CGGBP1-201ENST00000309534 CC2D2BQ6DHV5 1058 aa18.18■□□□□ 0.5
CGGBP1-201ENST00000309534 SP8Q8IXZ3 490 aa18.18■□□□□ 0.5
CGGBP1-201ENST00000309534 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 POLD1P28340 1107 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 LCORLQ8N3X6 602 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 RBM27Q9P2N5 1060 aaKnown RBP18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 NUP98P52948 1817 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 RBM28Q9NW13 759 aaKnown RBP18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 DDIT3P35638 169 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 COA1Q9GZY4 146 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 KAT14Q9H8E8 782 aa18.17■□□□□ 0.5
CGGBP1-201ENST00000309534 GNAQP50148 359 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 CTDSPL2Q05D32 466 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 TOB2Q14106 344 aaPredicted RBP18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 TEX11Q8IYF3 940 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 HOOK1Q9UJC3 728 aaKnown RBP18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 CCDC183Q5T5S1 534 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 MFSD14BQ5SR56 506 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 ANKRD36CQ5JPF3 1778 aa18.16■□□□□ 0.5
CGGBP1-201ENST00000309534 NOL7Q9UMY1 257 aaKnown RBP18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 PDIA3P30101 505 aaKnown RBP18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 SLFNL1Q499Z3 407 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 TTC6Q86TZ1 520 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 JAG2Q9Y219 1238 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 KINO60870 393 aaKnown RBP18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 MECOMQ03112 1051 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
CGGBP1-201ENST00000309534 USP48Q86UV5 1035 aa18.14■□□□□ 0.5
CGGBP1-201ENST00000309534 ME1P48163 572 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 SLC26A6Q9BXS9 759 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 TSPY3P0CV98 308 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 TSPY8P0CW00 308 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 TPM4P67936 248 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 SASS6Q6UVJ0 657 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 CEP131Q9UPN4 1083 aa18.14■□□□□ 0.49
CGGBP1-201ENST00000309534 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 MTMR6Q9Y217 621 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 CNPY2Q9Y2B0 182 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 GPSM2P81274 684 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 EXOSC10Q01780 885 aaKnown RBP18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 MB21D2Q8IYB1 491 aaPredicted RBP18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 GOLGA6L6A8MZA4 724 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 LIFRP42702 1097 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
CGGBP1-201ENST00000309534 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 USP17L21D6R901 530 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 LARGE1O95461 756 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 DNM1Q05193 864 aaKnown RBP18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 SCRN1Q12765 414 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 DDX19AQ9NUU7 478 aaKnown RBP18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 HDAC9Q9UKV0 1011 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 PLCB2Q00722 1185 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 GTF2IP78347 998 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 GRPEL1Q9HAV7 217 aa18.12■□□□□ 0.49
CGGBP1-201ENST00000309534 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms