RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NEUROD6Q96NK8 337 aa24.49■■□□□ 1.51
PDZRN3-202ENST00000308537 FAM198AQ9UFP1 575 aa24.49■■□□□ 1.51
PDZRN3-202ENST00000308537 MCAMP43121 646 aa24.48■■□□□ 1.51
PDZRN3-202ENST00000308537 TNNI3KQ59H18 835 aa24.48■■□□□ 1.51
PDZRN3-202ENST00000308537 CFHR5Q9BXR6 569 aa24.48■■□□□ 1.51
PDZRN3-202ENST00000308537 MYO5AQ9Y4I1 1855 aaKnown RBP24.48■■□□□ 1.51
PDZRN3-202ENST00000308537 FPGT-TNNI3KV9GXZ4 949 aa24.48■■□□□ 1.51
PDZRN3-202ENST00000308537 SURF6O75683 361 aaKnown RBP24.47■■□□□ 1.51
PDZRN3-202ENST00000308537 CAPN15O75808 1086 aa24.47■■□□□ 1.51
PDZRN3-202ENST00000308537 ZGPATQ8N5A5 531 aaKnown RBP24.47■■□□□ 1.51
PDZRN3-202ENST00000308537 FAM163AQ96GL9 167 aaPredicted RBP24.47■■□□□ 1.51
PDZRN3-202ENST00000308537 ABHD8Q96I13 439 aa24.47■■□□□ 1.51
PDZRN3-202ENST00000308537 R3HDMLQ9H3Y0 253 aa24.47■■□□□ 1.51
PDZRN3-202ENST00000308537 ATRNL1Q5VV63 1379 aa24.46■■□□□ 1.51
PDZRN3-202ENST00000308537 FAM151AQ8WW52 585 aa24.46■■□□□ 1.51
PDZRN3-202ENST00000308537 CNKSR2Q8WXI2 1034 aa24.46■■□□□ 1.51
PDZRN3-202ENST00000308537 DBNDD2Q9BQY9 259 aa24.46■■□□□ 1.51
PDZRN3-202ENST00000308537 RCAN3Q9UKA8 241 aa24.46■■□□□ 1.51
PDZRN3-202ENST00000308537 IGF2BP3O00425 579 aaKnown RBP eCLIP24.45■■□□□ 1.5
PDZRN3-202ENST00000308537 VGLL4Q14135 290 aa24.45■■□□□ 1.5
PDZRN3-202ENST00000308537 ZFPM1Q8IX07 1006 aa24.45■■□□□ 1.5
PDZRN3-202ENST00000308537 SPATA5Q8NB90 893 aa24.45■■□□□ 1.5
PDZRN3-202ENST00000308537 TMOD2Q9NZR1 351 aa24.45■■□□□ 1.5
PDZRN3-202ENST00000308537 ABCF2Q9UG63 623 aa24.45■■□□□ 1.5
PDZRN3-202ENST00000308537 TBC1D8O95759 1140 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 MAP3K9P80192 1104 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 MECOMQ03112 1051 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 SREBF2Q12772 1141 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 TBC1D9Q6ZT07 1266 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 MCOLN1Q9GZU1 580 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 ELP3Q9H9T3 547 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 ZBTB40Q9NUA8 1239 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 DBNLQ9UJU6 430 aaKnown RBP24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 DOCK2Q92608 1830 aa24.44■■□□□ 1.5
PDZRN3-202ENST00000308537 TESPA1A2RU30 521 aaPredicted RBP24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 MANSC4A6NHS7 340 aaPredicted RBP24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 SIRT2Q8IXJ6 389 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 EAF2Q96CJ1 260 aaPredicted RBP24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 MS4A4AQ96JQ5 239 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 IDI2Q9BXS1 227 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 USP40Q9NVE5 1235 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 TLR7Q9NYK1 1049 aaKnown RBP24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 COG6Q9Y2V7 657 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 SNCAIPQ9Y6H5 919 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 AK9Q5TCS8 1911 aa24.43■■□□□ 1.5
PDZRN3-202ENST00000308537 MAST2Q6P0Q8 1798 aa24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 MROH7-TTC4A0A0A0MT08 1334 aa24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 WDHD1O75717 1129 aaPredicted RBP24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 RHBDL3P58872 404 aa24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 NOM1Q5C9Z4 860 aaKnown RBP24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 IFNL1Q8IU54 200 aa24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 NSUN4Q96CB9 384 aaKnown RBP24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 OPTNQ96CV9 577 aa24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 PTPN18Q99952 460 aa24.42■■□□□ 1.5
PDZRN3-202ENST00000308537 GPR75-ASB3A0A0A6YYF3 556 aa24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 MS4A1P11836 297 aa24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 TCP10Q12799 353 aa24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 C20orf194Q5TEA3 1177 aa24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 SH3BP5LQ7L8J4 393 aa24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 ZNF512BQ96KM6 892 aaPredicted RBP24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.41■■□□□ 1.5
PDZRN3-202ENST00000308537 UQCRFS1P1P0C7P4 283 aa24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 INHBEP58166 350 aa24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 SPTY2D1Q68D10 685 aaPredicted RBP24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 ERICH6Q7L0X2 663 aa24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 DZIP1Q86YF9 867 aaKnown RBP24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 ZNF296Q8WUU4 475 aaPredicted RBP24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 DDX4Q9NQI0 724 aaKnown RBP24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 ZNF112Q9UJU3 913 aa24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 EXOC6BQ9Y2D4 811 aa24.4■■□□□ 1.5
PDZRN3-202ENST00000308537 CDK5RAP2Q96SN8 1893 aa24.39■■□□□ 1.5
PDZRN3-202ENST00000308537 SPDYE5A6NIY4 337 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 BTDP43251 543 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 RGS3P49796 1198 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 OS9Q13438 667 aaPredicted RBP24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 GORABQ5T7V8 394 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 MIGA2Q7L4E1 593 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 WRNIP1Q96S55 665 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 DDX19BQ9UMR2 479 aa24.39■■□□□ 1.49
PDZRN3-202ENST00000308537 GPR25O00155 361 aa24.38■■□□□ 1.49
PDZRN3-202ENST00000308537 DGKZQ13574 1117 aa24.38■■□□□ 1.49
PDZRN3-202ENST00000308537 ZKSCAN4Q969J2 545 aaPredicted RBP24.38■■□□□ 1.49
PDZRN3-202ENST00000308537 SNRKQ9NRH2 765 aa24.38■■□□□ 1.49
PDZRN3-202ENST00000308537 ENTPD3O75355 529 aa24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 CYP2E1P05181 493 aaPredicted RBP24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 INPP5BP32019 993 aa24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 MAP3K10Q02779 954 aa24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 BRI3BPQ8WY22 251 aa24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 CCDC8Q9H0W5 538 aaPredicted RBP24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 HTTP42858 3142 aa24.37■■□□□ 1.49
PDZRN3-202ENST00000308537 SLURP2P0DP57 97 aa24.36■■□□□ 1.49
PDZRN3-202ENST00000308537 HOOK2Q96ED9 719 aa24.36■■□□□ 1.49
PDZRN3-202ENST00000308537 ZNF341Q9BYN7 854 aa24.36■■□□□ 1.49
PDZRN3-202ENST00000308537 SIPA1L1O43166 1804 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 DDTLA6NHG4 134 aaPredicted RBP24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 ALDH1A1P00352 501 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 PDE3AQ14432 1141 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 TTC39AQ5SRH9 613 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 DCAF15Q66K64 600 aa24.35■■□□□ 1.49
PDZRN3-202ENST00000308537 SLF2Q8IX21 1173 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms