RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TOB2Q14106 344 aaPredicted RBP18.67■□□□□ 0.58
CCDC8-201ENST00000307522 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
CCDC8-201ENST00000307522 CCDC102AQ96A19 550 aa18.67■□□□□ 0.58
CCDC8-201ENST00000307522 MYCBPQ99417 103 aaPredicted RBP18.67■□□□□ 0.58
CCDC8-201ENST00000307522 SLC27A2O14975 620 aa18.67■□□□□ 0.58
CCDC8-201ENST00000307522 GSDMDP57764 484 aa18.67■□□□□ 0.58
CCDC8-201ENST00000307522 STARD3NLO95772 234 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 GUCY2CP25092 1073 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 GREM2Q9H772 168 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 WTIPA6NIX2 430 aaPredicted RBP18.66■□□□□ 0.58
CCDC8-201ENST00000307522 RESTQ13127 1097 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 DHX58Q96C10 678 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 GDAP1L1Q96MZ0 367 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 A0A0U1RQJ8 604 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 PSEN1P49768 467 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 CASP7P55210 303 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 HAND2P61296 217 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 DNAJC21Q5F1R6 531 aaKnown RBP18.66■□□□□ 0.58
CCDC8-201ENST00000307522 ATRIPQ8WXE1 791 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 EVI5LQ96CN4 794 aa18.66■□□□□ 0.58
CCDC8-201ENST00000307522 NCOA5Q9HCD5 579 aaKnown RBP18.66■□□□□ 0.58
CCDC8-201ENST00000307522 COL18A1P39060 1754 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 TAF5LO75529 589 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 RHOXF2BP0C7M4 288 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 SCARF1Q14162 830 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 NECTIN1Q15223 517 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 RHOXF2Q9BQY4 288 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 LRRFIP1Q32MZ4 808 aaKnown RBP18.65■□□□□ 0.58
CCDC8-201ENST00000307522 ATG9AQ7Z3C6 839 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 MICALL1Q8N3F8 863 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 NCAPGQ9BPX3 1015 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
CCDC8-201ENST00000307522 EFCAB8A8MWE9 144 aa18.64■□□□□ 0.58
CCDC8-201ENST00000307522 DHX8Q14562 1220 aaKnown RBP18.64■□□□□ 0.58
CCDC8-201ENST00000307522 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.58
CCDC8-201ENST00000307522 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 H7C1W4 665 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
CCDC8-201ENST00000307522 MARCH10Q8NA82 808 aaPredicted RBP18.64■□□□□ 0.57
CCDC8-201ENST00000307522 HINFPQ9BQA5 517 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 UBXN6Q9BZV1 441 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 DEF6Q9H4E7 631 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 FAM193AP78312 1265 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
CCDC8-201ENST00000307522 TTC41PQ6P2S7 1318 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 SERPINC1P01008 464 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 NDUFA8P51970 172 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 IL17RAQ96F46 866 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
CCDC8-201ENST00000307522 CNNM1Q9NRU3 951 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
CCDC8-201ENST00000307522 POLR3DP05423 398 aaPredicted RBP18.62■□□□□ 0.57
CCDC8-201ENST00000307522 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 COPRSQ9NQ92 184 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 LZTFL1Q9NQ48 299 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 SEC31BQ9NQW1 1179 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 VWA3AA6NCI4 1184 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 ADKP55263 362 aaKnown RBP18.62■□□□□ 0.57
CCDC8-201ENST00000307522 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
CCDC8-201ENST00000307522 TOGARAM2Q6ZUX3 1019 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 KLHL34Q8N239 644 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 EXOC4Q96A65 974 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 KCNG1Q9UIX4 513 aa18.62■□□□□ 0.57
CCDC8-201ENST00000307522 UTYO14607 1347 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 PSDA5PKW4 1024 aaPredicted RBP18.61■□□□□ 0.57
CCDC8-201ENST00000307522 NRDCO43847 1150 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 IFIT1P09914 478 aaKnown RBP18.61■□□□□ 0.57
CCDC8-201ENST00000307522 LIG3P49916 1009 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 FANCCQ00597 558 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 CCDC150Q8NCX0 1101 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 BANK1Q8NDB2 785 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 CCDC12Q8WUD4 166 aaPredicted RBP18.61■□□□□ 0.57
CCDC8-201ENST00000307522 RUFY2Q8WXA3 655 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 YY1AP1Q9H869 796 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 ATP2B1P20020 1258 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 METTL24Q5JXM2 366 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
CCDC8-201ENST00000307522 ITGA6P23229 1130 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 MAGEA9P43362 315 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 MTF1Q14872 753 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 Q6ZUG5 572 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 SLC51AQ86UW1 340 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 PNKPQ96T60 521 aa18.61■□□□□ 0.57
CCDC8-201ENST00000307522 IRS4O14654 1257 aaPredicted RBP18.6■□□□□ 0.57
CCDC8-201ENST00000307522 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
CCDC8-201ENST00000307522 IFIT5Q13325 482 aaKnown RBP18.6■□□□□ 0.57
CCDC8-201ENST00000307522 NKX1-1Q15270 411 aaPredicted RBP18.6■□□□□ 0.57
CCDC8-201ENST00000307522 NAT10Q9H0A0 1025 aaKnown RBP18.6■□□□□ 0.57
CCDC8-201ENST00000307522 CFAP45Q9UL16 551 aa18.6■□□□□ 0.57
CCDC8-201ENST00000307522 EYA2O00167 538 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 APOBRQ0VD83 1088 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 ITPK1Q13572 414 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
CCDC8-201ENST00000307522 PPP2R2CQ9Y2T4 447 aa18.59■□□□□ 0.57
CCDC8-201ENST00000307522 PPARDQ03181 441 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms