RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SPTY2D1Q68D10 685 aaPredicted RBP26.27■■□□□ 1.8
SMAD1-201ENST00000302085 FOXD4L3Q6VB84 417 aaPredicted RBP26.27■■□□□ 1.8
SMAD1-201ENST00000302085 SMARCC2Q8TAQ2 1214 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 WDR66Q8TBY9 1149 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 PDCP20941 246 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 AKNAD1Q5T1N1 836 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 CD209Q9NNX6 404 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 NAP1L2Q9ULW6 460 aaPredicted RBP26.27■■□□□ 1.8
SMAD1-201ENST00000302085 ATP6V0A2Q9Y487 856 aa26.27■■□□□ 1.8
SMAD1-201ENST00000302085 PDIA4P13667 645 aaKnown RBP26.26■■□□□ 1.79
SMAD1-201ENST00000302085 PDE6BP35913 854 aa26.26■■□□□ 1.79
SMAD1-201ENST00000302085 NCOA5Q9HCD5 579 aaKnown RBP26.26■■□□□ 1.79
SMAD1-201ENST00000302085 NSUN7Q8NE18 718 aaKnown RBP26.26■■□□□ 1.79
SMAD1-201ENST00000302085 VPS37CA5D8V6 355 aaPredicted RBP26.25■■□□□ 1.79
SMAD1-201ENST00000302085 TMED8Q6PL24 325 aaPredicted RBP26.25■■□□□ 1.79
SMAD1-201ENST00000302085 STAG1Q8WVM7 1258 aa26.25■■□□□ 1.79
SMAD1-201ENST00000302085 IL1R1P14778 569 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 DDX49Q9Y6V7 483 aaKnown RBP26.24■■□□□ 1.79
SMAD1-201ENST00000302085 KLF18A0A0U1RQI7 1052 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 PPARAQ07869 468 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 KLHL40Q2TBA0 621 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 MFSD6Q6ZSS7 791 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 DDX11Q96FC9 970 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 HPS5Q9UPZ3 1129 aa26.24■■□□□ 1.79
SMAD1-201ENST00000302085 LRRC37AA6NMS7 1700 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 TIAM2Q8IVF5 1701 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 SH2B2O14492 632 aaPredicted RBP26.23■■□□□ 1.79
SMAD1-201ENST00000302085 GRIK5Q16478 980 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 IGDCC4Q8TDY8 1250 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 CNNM2Q9H8M5 875 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 STK32BQ9NY57 414 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 AATFQ9NY61 560 aaKnown RBP eCLIP26.23■■□□□ 1.79
SMAD1-201ENST00000302085 ZSWIM5Q9P217 1185 aa26.23■■□□□ 1.79
SMAD1-201ENST00000302085 C6orf229H3BNL8 230 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 LDHBP07195 334 aaKnown RBP26.22■■□□□ 1.79
SMAD1-201ENST00000302085 CDC37L1Q7L3B6 337 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 KRT23Q9C075 422 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 ANAPC4Q9UJX5 808 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 ANGEL1Q9UNK9 670 aaKnown RBP26.22■■□□□ 1.79
SMAD1-201ENST00000302085 LTBP1Q14766 1721 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 IGSF3O75054 1194 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 KDM4AO75164 1064 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 ALDH1B1P30837 517 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 DZIP1Q86YF9 867 aaKnown RBP26.22■■□□□ 1.79
SMAD1-201ENST00000302085 MASTLQ96GX5 879 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 TMEM87BQ96K49 555 aa26.22■■□□□ 1.79
SMAD1-201ENST00000302085 CCDC88AQ3V6T2 1871 aa26.21■■□□□ 1.79
SMAD1-201ENST00000302085 PTPDC1A2A3K4 754 aa26.21■■□□□ 1.79
SMAD1-201ENST00000302085 MINDY4BA8MYZ0 360 aa26.21■■□□□ 1.79
SMAD1-201ENST00000302085 GIMAP6Q6P9H5 292 aa26.21■■□□□ 1.79
SMAD1-201ENST00000302085 ATP6V1DQ9Y5K8 247 aa26.21■■□□□ 1.79
SMAD1-201ENST00000302085 MAST2Q6P0Q8 1798 aa26.2■■□□□ 1.79
SMAD1-201ENST00000302085 SMIM22K7EJ46 135 aa26.2■■□□□ 1.79
SMAD1-201ENST00000302085 OLFM4Q6UX06 510 aa26.2■■□□□ 1.79
SMAD1-201ENST00000302085 CHMP4CQ96CF2 233 aa26.2■■□□□ 1.79
SMAD1-201ENST00000302085 SENP2Q9HC62 589 aa26.2■■□□□ 1.79
SMAD1-201ENST00000302085 CHD4Q14839 1912 aa26.2■■□□□ 1.79
SMAD1-201ENST00000302085 STK11IPQ8N1F8 1099 aa26.2■■□□□ 1.78
SMAD1-201ENST00000302085 GPT2Q8TD30 523 aa26.2■■□□□ 1.78
SMAD1-201ENST00000302085 GDPD2Q9HCC8 539 aa26.2■■□□□ 1.78
SMAD1-201ENST00000302085 GOLGA8BA8MQT2 603 aa26.19■■□□□ 1.78
SMAD1-201ENST00000302085 USP48Q86UV5 1035 aa26.19■■□□□ 1.78
SMAD1-201ENST00000302085 CRNKL1Q9BZJ0 848 aaKnown RBP26.19■■□□□ 1.78
SMAD1-201ENST00000302085 CNPY2Q9Y2B0 182 aa26.19■■□□□ 1.78
SMAD1-201ENST00000302085 COL11A2P13942 1736 aaPredicted RBP26.19■■□□□ 1.78
SMAD1-201ENST00000302085 HMGN5P82970 282 aaKnown RBP26.18■■□□□ 1.78
SMAD1-201ENST00000302085 CTR9Q6PD62 1173 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 RAB11FIP4Q86YS3 637 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 RNF41Q9H4P4 317 aaPredicted RBP26.18■■□□□ 1.78
SMAD1-201ENST00000302085 LY9Q9HBG7 655 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 CYP2D7A0A087X1C5 515 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 RRP12Q5JTH9 1297 aaKnown RBP26.18■■□□□ 1.78
SMAD1-201ENST00000302085 MPNDQ8N594 471 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 FAM184AQ8NB25 1140 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 TCHHQ07283 1943 aa26.18■■□□□ 1.78
SMAD1-201ENST00000302085 TMEM67Q5HYA8 995 aa26.17■■□□□ 1.78
SMAD1-201ENST00000302085 FERMT3Q86UX7 667 aa26.17■■□□□ 1.78
SMAD1-201ENST00000302085 C2CD5Q86YS7 1000 aa26.17■■□□□ 1.78
SMAD1-201ENST00000302085 NCLP19338 710 aaKnown RBP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 GSTO1P78417 241 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 ZNF622Q969S3 477 aaKnown RBP eCLIP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 DCP1AQ9NPI6 582 aaPredicted RBP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 TOMM22Q9NS69 142 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 BAZ2AQ9UIF9 1905 aaKnown RBP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 USP17L12C9JPN9 530 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 USP17L21D6R901 530 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 IFIT3O14879 490 aaKnown RBP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 RIMBP2O15034 1052 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 PPFIA3O75145 1194 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 FDPSP14324 419 aaKnown RBP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 DNM1Q05193 864 aaKnown RBP26.16■■□□□ 1.78
SMAD1-201ENST00000302085 DIXDC1Q155Q3 683 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 SGMS1Q86VZ5 419 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 TMEM87AQ8NBN3 555 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 ATP8A2Q9NTI2 1148 aa26.16■■□□□ 1.78
SMAD1-201ENST00000302085 LIFRP42702 1097 aa26.15■■□□□ 1.78
SMAD1-201ENST00000302085 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.78
SMAD1-201ENST00000302085 DHX16O60231 1041 aaKnown RBP26.14■■□□□ 1.77
SMAD1-201ENST00000302085 APOA5Q6Q788 366 aa26.14■■□□□ 1.77
SMAD1-201ENST00000302085 DUOX1Q9NRD9 1551 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms