RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 FUT8Q9BYC5 575 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 KCND1Q9NSA2 647 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 MRFAP1Q9Y605 127 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CTAGE9A4FU28 777 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 H3BQF6 201 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 FOXN1O15353 648 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 AFMP43652 599 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 KIF23Q02241 960 aaPredicted RBP13.04□□□□□ -0.32
TRUB1-201ENST00000298746 SLC39A14Q15043 492 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 BRD3Q15059 726 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 KRT40Q6A162 431 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CEP112Q8N8E3 955 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 RAPGEF4Q8WZA2 1011 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 IP6K1Q92551 441 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 DRC1Q96MC2 740 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 NEO1Q92859 1461 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 POLR2DO15514 142 aaKnown RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 EXOSC10Q01780 885 aaKnown RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 N4BP1O75113 896 aaKnown RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 SRLQ86TD4 932 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 CDKL5O76039 1030 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 SRGAP1Q7Z6B7 1085 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
TRUB1-201ENST00000298746 SAMSN1Q9NSI8 373 aaKnown RBP13.03□□□□□ -0.32
TRUB1-201ENST00000298746 MAST3O60307 1309 aa13.02□□□□□ -0.32
TRUB1-201ENST00000298746 A0A1B0GUL7 405 aa13.02□□□□□ -0.32
TRUB1-201ENST00000298746 CAGE1Q8TC20 777 aa13.02□□□□□ -0.32
TRUB1-201ENST00000298746 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
TRUB1-201ENST00000298746 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
TRUB1-201ENST00000298746 NUTM2AQ8IVF1 878 aaPredicted RBP13.02□□□□□ -0.33
TRUB1-201ENST00000298746 RGS22Q8NE09 1264 aa13.02□□□□□ -0.33
TRUB1-201ENST00000298746 SLC20A2Q08357 652 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
TRUB1-201ENST00000298746 C19orf44Q9H6X5 657 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 FANCGO15287 622 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 FGAP02671 866 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 SHC4Q6S5L8 630 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 MICALL1Q8N3F8 863 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 ANKRD24Q8TF21 1146 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
TRUB1-201ENST00000298746 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
TRUB1-201ENST00000298746 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 M0R2C6 588 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
TRUB1-201ENST00000298746 TFRCP02786 760 aaKnown RBP13.01□□□□□ -0.33
TRUB1-201ENST00000298746 PDE4BQ07343 736 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
TRUB1-201ENST00000298746 OSBP2Q969R2 916 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 HINFPQ9BQA5 517 aa13.01□□□□□ -0.33
TRUB1-201ENST00000298746 CCT6AP40227 531 aaKnown RBP13□□□□□ -0.33
TRUB1-201ENST00000298746 POSTNQ15063 836 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 ZNF790Q6PG37 636 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
TRUB1-201ENST00000298746 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
TRUB1-201ENST00000298746 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 CDC23Q9UJX2 597 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 COBLO75128 1261 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 NUP133Q8WUM0 1156 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 TNRQ92752 1358 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 SH3TC1Q8TE82 1336 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 CUTAO60888 179 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
TRUB1-201ENST00000298746 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 SLC35F6Q8N357 371 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 TC2NQ8N9U0 490 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 CAPZA3Q96KX2 299 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 FAM204AQ9H8W3 233 aa13□□□□□ -0.33
TRUB1-201ENST00000298746 XRN1Q8IZH2 1706 aaKnown RBP13□□□□□ -0.33
TRUB1-201ENST00000298746 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
TRUB1-201ENST00000298746 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 EFCC1Q9HA90 598 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 N4BP3O15049 544 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 ZBTB43O43298 467 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 CDC27P30260 824 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 CASP8Q14790 479 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 LRRC24Q50LG9 513 aa12.99□□□□□ -0.33
TRUB1-201ENST00000298746 CTR9Q6PD62 1173 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms