RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 EVCP57679 992 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 FGD1P98174 961 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 TRDNQ13061 729 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 OLFM4Q6UX06 510 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 DPP8Q6V1X1 898 aaPredicted RBP18.36■□□□□ 0.53
LSM6-201ENST00000296581 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 COA1Q9GZY4 146 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
LSM6-201ENST00000296581 FAM205AQ6ZU69 1335 aa18.36■□□□□ 0.53
LSM6-201ENST00000296581 PRC1O43663 620 aa18.35■□□□□ 0.53
LSM6-201ENST00000296581 ANTXR2P58335 489 aa18.35■□□□□ 0.53
LSM6-201ENST00000296581 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
LSM6-201ENST00000296581 CHST3Q7LGC8 479 aa18.35■□□□□ 0.53
LSM6-201ENST00000296581 SDR42E1Q8WUS8 393 aa18.35■□□□□ 0.53
LSM6-201ENST00000296581 PFKFB2O60825 505 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 CHRNA5P30532 468 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 GSTO1P78417 241 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 GRIK5Q16478 980 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 ANAPC4Q9UJX5 808 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
LSM6-201ENST00000296581 GJB2P29033 226 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 APOBRQ0VD83 1088 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 AKNAD1Q5T1N1 836 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
LSM6-201ENST00000296581 AATFQ9NY61 560 aaKnown RBP eCLIP18.34■□□□□ 0.53
LSM6-201ENST00000296581 NEDD4P46934 1319 aa18.34■□□□□ 0.53
LSM6-201ENST00000296581 MYH2Q9UKX2 1941 aa18.33■□□□□ 0.53
LSM6-201ENST00000296581 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.53
LSM6-201ENST00000296581 CTDSPL2Q05D32 466 aa18.33■□□□□ 0.53
LSM6-201ENST00000296581 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.53
LSM6-201ENST00000296581 CRNKL1Q9BZJ0 848 aaKnown RBP18.33■□□□□ 0.53
LSM6-201ENST00000296581 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.53
LSM6-201ENST00000296581 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.53
LSM6-201ENST00000296581 BAG4O95429 457 aaKnown RBP18.33■□□□□ 0.52
LSM6-201ENST00000296581 PPARAQ07869 468 aa18.33■□□□□ 0.52
LSM6-201ENST00000296581 STK3Q13188 491 aa18.33■□□□□ 0.52
LSM6-201ENST00000296581 EYA3Q99504 573 aa18.33■□□□□ 0.52
LSM6-201ENST00000296581 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.52
LSM6-201ENST00000296581 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 LDHCP07864 332 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 CYB5R4Q7L1T6 521 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 KIF13BQ9NQT8 1826 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 LAMB1P07942 1786 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 PPP4CP60510 307 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 SCRN1Q12765 414 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 KRT23Q9C075 422 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 ATP8A2Q9NTI2 1148 aa18.32■□□□□ 0.52
LSM6-201ENST00000296581 B4E1Z4 1266 aa18.31■□□□□ 0.52
LSM6-201ENST00000296581 SYT1P21579 422 aa18.31■□□□□ 0.52
LSM6-201ENST00000296581 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
LSM6-201ENST00000296581 MFSD14BQ5SR56 506 aa18.31■□□□□ 0.52
LSM6-201ENST00000296581 MFSD6Q6ZSS7 791 aa18.31■□□□□ 0.52
LSM6-201ENST00000296581 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
LSM6-201ENST00000296581 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
LSM6-201ENST00000296581 GPHNQ9NQX3 736 aaPredicted RBP18.31■□□□□ 0.52
LSM6-201ENST00000296581 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
LSM6-201ENST00000296581 RBM10P98175 930 aaKnown RBP18.3■□□□□ 0.52
LSM6-201ENST00000296581 NAP1L5Q96NT1 182 aaPredicted RBP18.3■□□□□ 0.52
LSM6-201ENST00000296581 LLPHQ9BRT6 129 aaKnown RBP18.3■□□□□ 0.52
LSM6-201ENST00000296581 STX6O43752 255 aa18.3■□□□□ 0.52
LSM6-201ENST00000296581 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
LSM6-201ENST00000296581 DIXDC1Q155Q3 683 aa18.3■□□□□ 0.52
LSM6-201ENST00000296581 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
LSM6-201ENST00000296581 DCP1AQ9NPI6 582 aaPredicted RBP18.3■□□□□ 0.52
LSM6-201ENST00000296581 INCENPQ9NQS7 918 aa18.3■□□□□ 0.52
LSM6-201ENST00000296581 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
LSM6-201ENST00000296581 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
LSM6-201ENST00000296581 CC2D2BQ6DHV5 1058 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 CTR9Q6PD62 1173 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 CHMP4CQ96CF2 233 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 FAM163AQ96GL9 167 aaPredicted RBP18.29■□□□□ 0.52
LSM6-201ENST00000296581 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
LSM6-201ENST00000296581 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 BAG3O95817 575 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 GTF2IP78347 998 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 MTA3Q9BTC8 594 aa18.29■□□□□ 0.52
LSM6-201ENST00000296581 MINDY4BA8MYZ0 360 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 PTMSP20962 102 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 ZSWIM5Q9P217 1185 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 GAKO14976 1311 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 KDM4AO75164 1064 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 FGRP09769 529 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 ZSCAN22P10073 491 aaPredicted RBP18.28■□□□□ 0.52
LSM6-201ENST00000296581 PCP11498 1178 aaKnown RBP18.28■□□□□ 0.52
LSM6-201ENST00000296581 SLF2Q8IX21 1173 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 IGDCC4Q8TDY8 1250 aa18.28■□□□□ 0.52
LSM6-201ENST00000296581 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
LSM6-201ENST00000296581 KLF18A0A0U1RQI7 1052 aa18.27■□□□□ 0.52
LSM6-201ENST00000296581 PDCP20941 246 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms