RNA–Protein interactions for RNA: ENST00000293826.4

TNFSF12-TNFSF13-201, Transcript of TNFSF12-TNFSF13 readthrough, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF12-TNFSF13, Length 1,816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13-201ENST00000293826 COL9A3Q14050 684 aaPredicted RBP28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 RSBN1LQ6PCB5 846 aaPredicted RBP28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 SH3RF3Q8TEJ3 882 aaPredicted RBP28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 IL17RAQ96F46 866 aa28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 SBF1O95248 1867 aa28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 GAKO14976 1311 aa28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 PATL2C9JE40 543 aaKnown RBP28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 CYP21A2P08686 494 aa28.46■■■□□ 2.15
TNFSF12-TNFSF13-201ENST00000293826 LDHCP07864 332 aa28.45■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 ADCK5Q3MIX3 580 aa28.45■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 HAND2P61296 217 aa28.44■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 IFNL3Q8IZI9 196 aa28.44■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 FAM163AQ96GL9 167 aaPredicted RBP28.44■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 GPR75-ASB3A0A0A6YYF3 556 aa28.43■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 CD2BP2O95400 341 aaKnown RBP28.43■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 KCNB2Q92953 911 aa28.43■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 BAZ2AQ9UIF9 1905 aaKnown RBP28.43■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 K7ELQ4 463 aaPredicted RBP28.43■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 GMLQ99445 158 aa28.43■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 IGSF3O75054 1194 aa28.42■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 CRKP46108 304 aa28.42■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 CIAPIN1Q6FI81 312 aa28.42■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 CDK5RAP2Q96SN8 1893 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 SMIM22K7EJ46 135 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 GNAT2P19087 354 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 PPP4CP60510 307 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 TMED8Q6PL24 325 aaPredicted RBP28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 SLKQ9H2G2 1235 aaPredicted RBP28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 ZNF541Q9H0D2 1346 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 FZD9O00144 591 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 ST18O60284 1047 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 CPA1P15085 419 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 LMNB1P20700 586 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 RHBDL3P58872 404 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 TEKT1Q969V4 418 aa28.41■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 DICER1Q9UPY3 1922 aaKnown RBP28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 SHTN1A0MZ66 631 aa28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 BAG3O95817 575 aa28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 EVX2Q03828 476 aa28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 STOX1Q6ZVD7 989 aa28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 SLF2Q8IX21 1173 aa28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 NOL10Q9BSC4 688 aaKnown RBP28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 UPF3BQ9BZI7 483 aaKnown RBP28.4■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 GPR162Q16538 588 aa28.39■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 APOBEC3HQ6NTF7 200 aaKnown RBP28.39■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 CRNKL1Q9BZJ0 848 aaKnown RBP28.39■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 NBPF3Q9H094 633 aa28.39■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 NAPBQ9H115 298 aa28.39■■■□□ 2.14
TNFSF12-TNFSF13-201ENST00000293826 TDO2P48775 406 aa28.39■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 RBM5P52756 815 aaKnown RBP eCLIP28.39■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 HHIPL2Q6UWX4 724 aa28.39■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 SPRYD3Q8NCJ5 442 aa28.39■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 IL27Q8NEV9 243 aa28.39■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CYP2D7A0A087X1C5 515 aa28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 ALX1Q15699 326 aa28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 SLC4A8Q2Y0W8 1093 aa28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 RNF20Q5VTR2 975 aa28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TGFBRAP1Q8WUH2 860 aa28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 JAKMIP1Q96N16 626 aaKnown RBP28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 DCP1AQ9NPI6 582 aaPredicted RBP28.38■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 ZKSCAN1P17029 563 aaPredicted RBP28.37■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CTNNA3Q9UI47 895 aa28.37■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 GJA3Q9Y6H8 435 aa28.37■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 MYO3BQ8WXR4 1341 aa28.37■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 ZDHHC15Q96MV8 337 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 LAMA4Q16363 1823 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 EIF6P56537 245 aaKnown RBP28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CTDSPL2Q05D32 466 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 IMMTQ16891 758 aaKnown RBP28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CFAP100Q494V2 611 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TEX11Q8IYF3 940 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 STK11IPQ8N1F8 1099 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 NACAP1Q9BZK3 213 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 INCENPQ9NQS7 918 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 RNF181Q9P0P0 153 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TACC3Q9Y6A5 838 aa28.36■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 USP5P45974 858 aa28.35■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CDC42EP5Q6NZY7 148 aa28.35■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TBC1D10CQ8IV04 446 aa28.35■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 MAPKAPK5Q8IW41 473 aa28.35■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 SERPINA10Q9UK55 444 aa28.35■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 ZNF213O14771 459 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CASTP20810 708 aaKnown RBP28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 NEK4P51957 841 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TNIP1Q15025 636 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 AGBL3Q8NEM8 1001 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 NKX2-3Q8TAU0 364 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 USP40Q9NVE5 1235 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 MKRN1Q9UHC7 482 aaKnown RBP28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 RPAP1Q9BWH6 1393 aaPredicted RBP28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 E7EWF7 191 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CYP2D6P10635 497 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CACNB3P54284 484 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TSGA10IPQ3SY00 556 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 CTR9Q6PD62 1173 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 ZMYM6O95789 1325 aa28.34■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 TIAM2Q8IVF5 1701 aa28.33■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 MINDY4BA8MYZ0 360 aa28.33■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 USP17L8P0C7I0 530 aa28.33■■■□□ 2.13
TNFSF12-TNFSF13-201ENST00000293826 HDLBPQ00341 1268 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms