RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 EDC3Q96F86 508 aaKnown RBP17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 UIMC1Q96RL1 719 aa17.27■□□□□ 0.36
SHROOM4-201ENST00000289292 WDR62O43379 1518 aa17.27■□□□□ 0.35
SHROOM4-201ENST00000289292 TAB2Q9NYJ8 693 aa17.27■□□□□ 0.35
SHROOM4-201ENST00000289292 PYCARDQ9ULZ3 195 aa17.27■□□□□ 0.35
SHROOM4-201ENST00000289292 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 TSGA10Q9BZW7 698 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 STAMQ92783 540 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 LDHCP07864 332 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 HOXC9P31274 260 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 IQUBQ8NA54 791 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 SUCLG2Q96I99 432 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 PSMD1Q99460 953 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 MCM9Q9NXL9 1143 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 PTH1RQ03431 593 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
SHROOM4-201ENST00000289292 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 BLZF1Q9H2G9 400 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 LETM2Q2VYF4 491 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 PLCH2O75038 1416 aa17.25■□□□□ 0.35
SHROOM4-201ENST00000289292 ERCC6LQ2NKX8 1250 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 KRT79Q5XKE5 535 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 ATL3Q6DD88 541 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 SLF1Q9BQI6 1058 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 SAP30BPQ9UHR5 308 aaKnown RBP17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 PDE4DQ08499 809 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 NIP7Q9Y221 180 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 GSTO1P78417 241 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 PPP1R7Q15435 360 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 BEND3Q5T5X7 828 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 DESI2Q9BSY9 194 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 IMPACTQ9P2X3 320 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 MRRFQ96E11 262 aaKnown RBP17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 SYNCQ9H7C4 482 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 LGR6Q9HBX8 967 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 ZBTB21Q9ULJ3 1066 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
SHROOM4-201ENST00000289292 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 C8orf74Q6P047 294 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 TNNC1P63316 161 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 TRIM31Q9BZY9 425 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 NRBP1Q9UHY1 535 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 PTPN21Q16825 1174 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 IQCGQ9H095 443 aaKnown RBP17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 SAMD15Q9P1V8 674 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 NDUFAB1O14561 156 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 RSRC1Q96IZ7 334 aaKnown RBP17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 NFE2L3Q9Y4A8 694 aa17.23■□□□□ 0.35
SHROOM4-201ENST00000289292 ZBTB16Q05516 673 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 TTF2Q9UNY4 1162 aaKnown RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 FAM13AO94988 1023 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 CALML3P27482 149 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 POSTNQ15063 836 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 APBB1IPQ7Z5R6 666 aaPredicted RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 CCDC97Q96F63 343 aaPredicted RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 FAM89AQ96GI7 184 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 STMN4Q9H169 189 aaPredicted RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 GNAT2P19087 354 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 TPCN1Q9ULQ1 816 aa17.22■□□□□ 0.35
SHROOM4-201ENST00000289292 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 XAGE2Q96GT9 111 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 INPP5BP32019 993 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 HINFPQ9BQA5 517 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 PAK1Q13153 545 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 SMARCC2Q8TAQ2 1214 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 AOX1Q06278 1338 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 TRAF5O00463 557 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 GNAQP50148 359 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 KLHL7Q8IXQ5 586 aa17.21■□□□□ 0.35
SHROOM4-201ENST00000289292 CMTR1Q8N1G2 835 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms