RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 USP5P45974 858 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 APOA5Q6Q788 366 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 OVOS2A0A0G2JMS6 1433 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 WTIPA6NIX2 430 aaPredicted RBP13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 CPLX3Q8WVH0 158 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 SETDB2Q96T68 719 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 RCOR1Q9UKL0 485 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 STAMQ92783 540 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 NEDD4P46934 1319 aa13.69□□□□□ -0.22
SLC13A3-201ENST00000279027 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 CDC27P30260 824 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 PNOCQ13519 176 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 ERFEQ4G0M1 354 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 KRT23Q9C075 422 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 PFKFB1P16118 471 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 ANTXR2P58335 489 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 AKNAD1Q5T1N1 836 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 IFIT1BQ5T764 474 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 CCDC34Q96HJ3 373 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 SFPQP23246 707 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 STX17P56962 302 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 CBX1P83916 185 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 ZNF827Q17R98 1081 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 RNF41Q9H4P4 317 aaPredicted RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 BRMS1Q9HCU9 246 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 CATIPQ7Z7H3 387 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 VAT1LQ9HCJ6 419 aa13.68□□□□□ -0.22
SLC13A3-201ENST00000279027 MROH5Q6ZUA9 1318 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 DHX8Q14562 1220 aaKnown RBP13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 ESR2Q92731 530 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 MKNK2Q9HBH9 465 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 BRAPQ7Z569 592 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 WASF1Q92558 559 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 DHX58Q96C10 678 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 CSF1RP07333 972 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 NR5A1Q13285 461 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 ADALQ6DHV7 355 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
SLC13A3-201ENST00000279027 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 NLRP5P59047 1200 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 AMOTL1Q8IY63 956 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 GOLGA8FQ08AF8 430 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 GOLGA8DPQ0D2H9 430 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 ZNF174Q15697 407 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 MCM9Q9NXL9 1143 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 CACNA1FO60840 1977 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 USP17L21D6R901 530 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 CNNM2Q9H8M5 875 aa13.66□□□□□ -0.22
SLC13A3-201ENST00000279027 CHD2O14647 1828 aaKnown RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 UBASH3AP57075 661 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 KIAA1468Q9P260 1216 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 F8W031 263 aaPredicted RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 POLR2DO15514 142 aaKnown RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 PLIN2Q99541 437 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 PPARAQ07869 468 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 GRAMD1CQ8IYS0 662 aa13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
SLC13A3-201ENST00000279027 CPDO75976 1380 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms