RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 H3BRJ5 948 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 LINC01387J3KSC0 135 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 GPR182O15218 404 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 TREHO43280 583 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 IKBKEQ14164 716 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 IGF2-ASQ6U949 168 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 NLGN1Q8N2Q7 840 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 KLHL23Q8NBE8 558 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 WNT8BQ93098 351 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 TINF2Q9BSI4 451 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 ADAM19Q9H013 955 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 SEC31BQ9NQW1 1179 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 TERF2IPQ9NYB0 399 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 NOP58Q9Y2X3 529 aaKnown RBP6.1□□□□□ -1.43
CD44-202ENST00000278385 DIP2BQ9P265 1576 aa6.1□□□□□ -1.43
CD44-202ENST00000278385 EIF3JO75822 258 aaKnown RBP6.09□□□□□ -1.43
CD44-202ENST00000278385 ATP2B1P20020 1258 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 COL8A1P27658 744 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 PIP4K2BP78356 416 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 GRIK4Q16099 956 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 HSP90AB2PQ58FF8 381 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 KIAA0319Q5VV43 1072 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 FBF1Q8TES7 1133 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 SLC7A3Q8WY07 619 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 NXPE3Q969Y0 559 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 PIF1Q9H611 641 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 NPHS2Q9NP85 383 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 CHPF2Q9P2E5 772 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 SPG7Q9UQ90 795 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 LAS1LQ9Y4W2 734 aaKnown RBP6.09□□□□□ -1.43
CD44-202ENST00000278385 GLI2P10070 1586 aa6.09□□□□□ -1.43
CD44-202ENST00000278385 EPRSP07814 1512 aaKnown RBP6.09□□□□□ -1.44
CD44-202ENST00000278385 A0A1W2PP55 124 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 MSTNO14793 375 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 TRPA1O75762 1119 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 MRPL58Q14197 206 aaKnown RBP6.08□□□□□ -1.44
CD44-202ENST00000278385 COL19A1Q14993 1142 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 TCEAL1Q15170 157 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 GRIK5Q16478 980 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 EAPPQ56P03 285 aaPredicted RBP6.08□□□□□ -1.44
CD44-202ENST00000278385 GPAT2Q6NUI2 795 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 BHLHE41Q9C0J9 482 aaPredicted RBP6.08□□□□□ -1.44
CD44-202ENST00000278385 MRPL18Q9H0U6 180 aaKnown RBP6.08□□□□□ -1.44
CD44-202ENST00000278385 OSGEPQ9NPF4 335 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 PRDM10Q9NQV6 1147 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 SH2B1Q9NRF2 756 aaPredicted RBP6.08□□□□□ -1.44
CD44-202ENST00000278385 WDR7Q9Y4E6 1490 aa6.08□□□□□ -1.44
CD44-202ENST00000278385 ABCA8O94911 1581 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 A0A096LPE4 126 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 GIPC1O14908 333 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 FSCN2O14926 492 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 PTMSP20962 102 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 CD68P34810 354 aaPredicted RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 GTF2F1P35269 517 aaKnown RBP eCLIP6.07□□□□□ -1.44
CD44-202ENST00000278385 GATA4P43694 442 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 C19orf57Q0VDD7 668 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 COL9A3Q14050 684 aaPredicted RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 FAM50AQ14320 339 aaKnown RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 SUZ12Q15022 739 aaKnown RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 ENOX2Q16206 610 aaKnown RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 HP1BP3Q5SSJ5 553 aaPredicted RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 USPL1Q5W0Q7 1092 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 TXNDC11Q6PKC3 985 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 DTHD1Q6ZMT9 781 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 ZCRB1Q8TBF4 217 aaKnown RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 PMM1Q92871 262 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 LENG1Q96BZ8 264 aaPredicted RBP6.07□□□□□ -1.44
CD44-202ENST00000278385 FRMD6Q96NE9 622 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 LATS2Q9NRM7 1088 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 ATP10BO94823 1461 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 TEX14Q8IWB6 1497 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
CD44-202ENST00000278385 KRBA1A5PL33 1030 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 CREB3O43889 395 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 LDHBP07195 334 aaKnown RBP6.06□□□□□ -1.44
CD44-202ENST00000278385 XRCC5P13010 732 aaKnown RBP6.06□□□□□ -1.44
CD44-202ENST00000278385 ACPPP15309 386 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 EPHA1P21709 976 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 BAG6P46379 1132 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 RBL2Q08999 1139 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 DUOXA2Q1HG44 320 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 PLA2G4EQ3MJ16 856 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 LDLRAD1Q5T700 205 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 CCNJLQ8IV13 435 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 TMTC2Q8N394 836 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 NME8Q8N427 588 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 PKNOX2Q96KN3 472 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 CLEC4MQ9H2X3 399 aaPredicted RBP6.06□□□□□ -1.44
CD44-202ENST00000278385 KIF13AQ9H1H9 1805 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
CD44-202ENST00000278385 CTTNBP2Q8WZ74 1663 aa6.05□□□□□ -1.44
CD44-202ENST00000278385 C1QTNF9BB2RNN3 333 aa6.05□□□□□ -1.44
CD44-202ENST00000278385 NFKBIEO00221 500 aa6.05□□□□□ -1.44
CD44-202ENST00000278385 PPFIA4O75335 1185 aa6.05□□□□□ -1.44
CD44-202ENST00000278385 XPCQ01831 940 aaPredicted RBP6.05□□□□□ -1.44
CD44-202ENST00000278385 PPP2R3AQ06190 1150 aa6.05□□□□□ -1.44
CD44-202ENST00000278385 DSC3Q14574 896 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms