RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CCDC191Q8NCU4 936 aa31.68■■■□□ 2.66
CBX4-201ENST00000269397 PHLPP2Q6ZVD8 1323 aa31.68■■■□□ 2.66
CBX4-201ENST00000269397 PLA2G4AP47712 749 aa31.68■■■□□ 2.66
CBX4-201ENST00000269397 PDE4BQ07343 736 aa31.68■■■□□ 2.66
CBX4-201ENST00000269397 LRRFIP1Q32MZ4 808 aaKnown RBP31.68■■■□□ 2.66
CBX4-201ENST00000269397 TBC1D10CQ8IV04 446 aa31.68■■■□□ 2.66
CBX4-201ENST00000269397 VSTM4Q8IW00 320 aa31.68■■■□□ 2.66
CBX4-201ENST00000269397 ZFYP08048 801 aaPredicted RBP31.67■■■□□ 2.66
CBX4-201ENST00000269397 ZBTB22O15209 634 aa31.67■■■□□ 2.66
CBX4-201ENST00000269397 APPP05067 770 aa31.67■■■□□ 2.66
CBX4-201ENST00000269397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.67■■■□□ 2.66
CBX4-201ENST00000269397 TIGD1Q96MW7 591 aa31.67■■■□□ 2.66
CBX4-201ENST00000269397 PCDHA5Q9Y5H7 936 aa31.67■■■□□ 2.66
CBX4-201ENST00000269397 TRDNQ13061 729 aa31.66■■■□□ 2.66
CBX4-201ENST00000269397 TICAM2Q86XR7 235 aa31.66■■■□□ 2.66
CBX4-201ENST00000269397 PDILTQ8N807 584 aa31.66■■■□□ 2.66
CBX4-201ENST00000269397 INCENPQ9NQS7 918 aa31.66■■■□□ 2.66
CBX4-201ENST00000269397 INTS13Q9NVM9 706 aa31.66■■■□□ 2.66
CBX4-201ENST00000269397 ANGEL1Q9UNK9 670 aaKnown RBP31.66■■■□□ 2.66
CBX4-201ENST00000269397 TRPM3Q9HCF6 1732 aaPredicted RBP31.66■■■□□ 2.66
CBX4-201ENST00000269397 CBFA2T2O43439 604 aa31.66■■■□□ 2.66
CBX4-201ENST00000269397 BMP6P22004 513 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 TAF3Q5VWG9 929 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 OLFM4Q6UX06 510 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 PARP3Q9Y6F1 533 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 ZMYM6O95789 1325 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 TAF7LQ5H9L4 462 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 STK11IPQ8N1F8 1099 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 CNNM3Q8NE01 707 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 MAP3K14Q99558 947 aa31.65■■■□□ 2.66
CBX4-201ENST00000269397 B4E1Z4 1266 aa31.64■■■□□ 2.66
CBX4-201ENST00000269397 TMCO3Q6UWJ1 677 aa31.64■■■□□ 2.66
CBX4-201ENST00000269397 VWA3AA6NCI4 1184 aa31.64■■■□□ 2.66
CBX4-201ENST00000269397 CCP110O43303 1012 aa31.64■■■□□ 2.66
CBX4-201ENST00000269397 FAM89AQ96GI7 184 aa31.64■■■□□ 2.66
CBX4-201ENST00000269397 CPDO75976 1380 aa31.64■■■□□ 2.65
CBX4-201ENST00000269397 POLR3GO15318 223 aaPredicted RBP31.63■■■□□ 2.65
CBX4-201ENST00000269397 TADA3O75528 432 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 DHX8Q14562 1220 aaKnown RBP31.63■■■□□ 2.65
CBX4-201ENST00000269397 RESP18Q5W5W9 173 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 PPP2R2CQ9Y2T4 447 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 PPP6R2O75170 966 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 JMYQ8N9B5 988 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 KCNH3Q9ULD8 1083 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 TJP1Q07157 1748 aa31.63■■■□□ 2.65
CBX4-201ENST00000269397 TUBB4AP04350 444 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 APOA5Q6Q788 366 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 PROSER2Q86WR7 435 aaPredicted RBP31.62■■■□□ 2.65
CBX4-201ENST00000269397 TMEM139Q8IV31 216 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 WDR24Q96S15 920 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 AKAP2Q9Y2D5 859 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 KIF1AQ12756 1690 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 ZRANB2O95218 330 aaKnown RBP eCLIP31.62■■■□□ 2.65
CBX4-201ENST00000269397 ATG3Q9NT62 314 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 ADKP55263 362 aaKnown RBP31.62■■■□□ 2.65
CBX4-201ENST00000269397 CCDC102BQ68D86 513 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 KRBA2Q6ZNG9 492 aa31.62■■■□□ 2.65
CBX4-201ENST00000269397 MCAMP43121 646 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 SLC9C2Q5TAH2 1124 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 SYNE4Q8N205 404 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 ARGLU1Q9NWB6 273 aaPredicted RBP31.61■■■□□ 2.65
CBX4-201ENST00000269397 GLI3P10071 1580 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 CCDC66A2RUB6 948 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 ZNF827Q17R98 1081 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 NFXL1Q6ZNB6 911 aa31.61■■■□□ 2.65
CBX4-201ENST00000269397 SH2B2O14492 632 aaPredicted RBP31.6■■■□□ 2.65
CBX4-201ENST00000269397 RANBP6O60518 1105 aaKnown RBP31.6■■■□□ 2.65
CBX4-201ENST00000269397 GNG11P61952 73 aa31.6■■■□□ 2.65
CBX4-201ENST00000269397 C4AP0C0L4 1744 aa31.6■■■□□ 2.65
CBX4-201ENST00000269397 C4BP0C0L5 1744 aa31.6■■■□□ 2.65
CBX4-201ENST00000269397 GRIN1Q05586 938 aa31.6■■■□□ 2.65
CBX4-201ENST00000269397 TRMT44Q8IYL2 757 aaKnown RBP31.6■■■□□ 2.65
CBX4-201ENST00000269397 SPEF2Q9C093 1822 aa31.59■■■□□ 2.65
CBX4-201ENST00000269397 TMEM94Q12767 1356 aa31.59■■■□□ 2.65
CBX4-201ENST00000269397 TOGARAM2Q6ZUX3 1019 aa31.59■■■□□ 2.65
CBX4-201ENST00000269397 IDH1O75874 414 aaKnown RBP31.59■■■□□ 2.65
CBX4-201ENST00000269397 ZSCAN12O43309 604 aa31.58■■■□□ 2.65
CBX4-201ENST00000269397 IARSP41252 1262 aaKnown RBP31.58■■■□□ 2.65
CBX4-201ENST00000269397 BAG1Q99933 345 aaPredicted RBP31.58■■■□□ 2.65
CBX4-201ENST00000269397 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.58■■■□□ 2.65
CBX4-201ENST00000269397 C19orf44Q9H6X5 657 aa31.58■■■□□ 2.65
CBX4-201ENST00000269397 PODXL2Q9NZ53 605 aa31.58■■■□□ 2.65
CBX4-201ENST00000269397 ARHGAP6O43182 974 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 FMR1Q06787 632 aaKnown RBP eCLIP31.57■■■□□ 2.64
CBX4-201ENST00000269397 TRIM29Q14134 588 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 GRAMD1CQ8IYS0 662 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 DESI2Q9BSY9 194 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 C1orf167Q5SNV9 1468 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 EFCAB8A8MWE9 144 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 ZBTB43O43298 467 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 CDKL5O76039 1030 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 SLC26A6Q9BXS9 759 aa31.57■■■□□ 2.64
CBX4-201ENST00000269397 UBN2Q6ZU65 1347 aa31.56■■■□□ 2.64
CBX4-201ENST00000269397 CDK11BP21127 795 aaKnown RBP31.56■■■□□ 2.64
CBX4-201ENST00000269397 TEX35Q5T0J7 233 aa31.56■■■□□ 2.64
CBX4-201ENST00000269397 CPLX2Q6PUV4 134 aaKnown RBP31.56■■■□□ 2.64
CBX4-201ENST00000269397 PRR29P0C7W0 189 aa31.56■■■□□ 2.64
CBX4-201ENST00000269397 ZCCHC17Q9NP64 241 aaKnown RBP31.56■■■□□ 2.64
CBX4-201ENST00000269397 GOLGA8AA7E2F4 631 aa31.55■■■□□ 2.64
CBX4-201ENST00000269397 CUTAO60888 179 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms