RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 GIPC1O14908 333 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 BMP15O95972 392 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 CACYBPQ9HB71 228 aaKnown RBP12.45□□□□□ -0.42
CHFR-201ENST00000266880 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHFR-201ENST00000266880 ANLNQ9NQW6 1124 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 APOEP02649 317 aa12.45□□□□□ -0.42
CHFR-201ENST00000266880 DNAJC8O75937 253 aaPredicted RBP12.44□□□□□ -0.42
CHFR-201ENST00000266880 PDE4BQ07343 736 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 NXNQ6DKJ4 435 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
CHFR-201ENST00000266880 MAP3K21Q5TCX8 1036 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 GOLGA4Q13439 2230 aaKnown RBP12.44□□□□□ -0.42
CHFR-201ENST00000266880 STK10O94804 968 aaKnown RBP12.44□□□□□ -0.42
CHFR-201ENST00000266880 NAPAP54920 295 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 VEZTQ9HBM0 779 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 TBC1D8O95759 1140 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 RANBP1P43487 201 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 TSC1Q92574 1164 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
CHFR-201ENST00000266880 CFAP70Q5T0N1 1121 aa12.44□□□□□ -0.42
CHFR-201ENST00000266880 TTC19Q6DKK2 380 aaPredicted RBP12.44□□□□□ -0.42
CHFR-201ENST00000266880 E2F5Q15329 346 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 KRT15P19012 456 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 MAN1A1P33908 653 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 PAK2Q13177 524 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
CHFR-201ENST00000266880 PPP4R1Q8TF05 950 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 A6NNZ2 444 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 ASIC2Q16515 512 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 ZNF75DP51815 510 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 SLC24A3Q9HC58 644 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 SYNRGQ9UMZ2 1314 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 ACRBPQ8NEB7 543 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 CFAP61Q8NHU2 1237 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 ARHGAP5Q13017 1502 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 TRIM75PA6NK02 468 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 RAB3GAP1Q15042 981 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 IFIT1BQ5T764 474 aaKnown RBP12.43□□□□□ -0.42
CHFR-201ENST00000266880 ANKRD20A3Q5VUR7 823 aa12.43□□□□□ -0.42
CHFR-201ENST00000266880 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
CHFR-201ENST00000266880 IRX4P78413 519 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 VPS37BQ9H9H4 285 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 KRT2P35908 639 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 PDCD2Q16342 344 aaPredicted RBP12.42□□□□□ -0.42
CHFR-201ENST00000266880 LARSQ9P2J5 1176 aaKnown RBP12.42□□□□□ -0.42
CHFR-201ENST00000266880 STX2P32856 288 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 NBPF7P0C2Y1 421 aaPredicted RBP12.42□□□□□ -0.42
CHFR-201ENST00000266880 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
CHFR-201ENST00000266880 TNFAIP3P21580 790 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 MTMR3Q13615 1198 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 ALDH1L2Q3SY69 923 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 SRGAP1Q7Z6B7 1085 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 SPATS2Q86XZ4 545 aaKnown RBP12.42□□□□□ -0.42
CHFR-201ENST00000266880 NUDCD3Q8IVD9 361 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 BCAP29Q9UHQ4 241 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
CHFR-201ENST00000266880 PPFIA4O75335 1185 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 TRIM27P14373 513 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 SDSP20132 328 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 CCDC13Q8IYE1 715 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 TNNI2P48788 182 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 TUBB2AQ13885 445 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 RPS6KA2Q15349 733 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
CHFR-201ENST00000266880 BSPRYQ5W0U4 402 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 TUBB2BQ9BVA1 445 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 ELP1O95163 1332 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 RNF40O75150 1001 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 HAUS8Q9BT25 410 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 PSMD2Q13200 908 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
CHFR-201ENST00000266880 PALMDQ9NP74 551 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 EPB41P11171 864 aaKnown RBP12.41□□□□□ -0.42
CHFR-201ENST00000266880 ATP2A3Q93084 1043 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 PPME1Q9Y570 386 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 ZNF644Q9H582 1327 aaPredicted RBP12.41□□□□□ -0.42
CHFR-201ENST00000266880 ZPR1O75312 459 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 KIF22Q14807 665 aa12.41□□□□□ -0.42
CHFR-201ENST00000266880 STARD3NLO95772 234 aa12.4□□□□□ -0.42
CHFR-201ENST00000266880 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms