RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 TMOD2Q9NZR1 351 aa27.56■■■□□ 2
APOE-201ENST00000252486 RNF113AO15541 343 aaKnown RBP27.55■■■□□ 2
APOE-201ENST00000252486 BTDP43251 543 aa27.55■■■□□ 2
APOE-201ENST00000252486 PPP4CP60510 307 aa27.55■■■□□ 2
APOE-201ENST00000252486 ZNF532Q9HCE3 1301 aa27.55■■■□□ 2
APOE-201ENST00000252486 TCRBV5S4A2TA0A5A2 114 aa27.54■■■□□ 2
APOE-201ENST00000252486 GSPT1P15170 499 aaKnown RBP27.54■■■□□ 2
APOE-201ENST00000252486 SPDYE2Q495Y8 402 aa27.54■■■□□ 2
APOE-201ENST00000252486 APOBEC3FQ8IUX4 373 aaKnown RBP27.54■■■□□ 2
APOE-201ENST00000252486 DCPSQ96C86 337 aaKnown RBP27.54■■■□□ 2
APOE-201ENST00000252486 TDRD3Q9H7E2 651 aaKnown RBP27.54■■■□□ 2
APOE-201ENST00000252486 GGA3Q9NZ52 723 aa27.54■■■□□ 2
APOE-201ENST00000252486 PCDHAC2Q9Y5I4 1007 aa27.54■■■□□ 2
APOE-201ENST00000252486 TOMM70O94826 608 aa27.53■■■□□ 2
APOE-201ENST00000252486 FKBP1CQ5VVH2 108 aa27.53■■■□□ 2
APOE-201ENST00000252486 ZNF70Q9UC06 446 aaPredicted RBP27.53■■■□□ 2
APOE-201ENST00000252486 AK9Q5TCS8 1911 aa27.52■■■□□ 2
APOE-201ENST00000252486 HIP1O00291 1037 aa27.52■■■□□ 2
APOE-201ENST00000252486 ANGEL2Q5VTE6 544 aaKnown RBP27.52■■■□□ 2
APOE-201ENST00000252486 CHADLQ6NUI6 762 aa27.52■■■□□ 2
APOE-201ENST00000252486 RBM46Q8TBY0 533 aaKnown RBP27.52■■■□□ 2
APOE-201ENST00000252486 APPBP2Q92624 585 aa27.52■■■□□ 2
APOE-201ENST00000252486 USP40Q9NVE5 1235 aa27.52■■■□□ 2
APOE-201ENST00000252486 POTEIP0CG38 1075 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 POTEJP0CG39 1038 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 SDSP20132 328 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 TNFAIP1Q13829 316 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 BMP2KLQ5H9B9 411 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 CDC42EP5Q6NZY7 148 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 ADGRA1Q86SQ6 560 aa27.51■■□□□ 1.99
APOE-201ENST00000252486 MAGEB6P1A0A0J9YX57 407 aa27.5■■□□□ 1.99
APOE-201ENST00000252486 CLRN2A0PK11 232 aa27.5■■□□□ 1.99
APOE-201ENST00000252486 SKAP1Q86WV1 359 aa27.5■■□□□ 1.99
APOE-201ENST00000252486 SULF1Q8IWU6 871 aa27.5■■□□□ 1.99
APOE-201ENST00000252486 SMC1BQ8NDV3 1235 aa27.5■■□□□ 1.99
APOE-201ENST00000252486 AATFQ9NY61 560 aaKnown RBP eCLIP27.5■■□□□ 1.99
APOE-201ENST00000252486 ASTN2O75129 1339 aaPredicted RBP27.49■■□□□ 1.99
APOE-201ENST00000252486 TNNI2P48788 182 aa27.49■■□□□ 1.99
APOE-201ENST00000252486 CDC37L1Q7L3B6 337 aa27.49■■□□□ 1.99
APOE-201ENST00000252486 VEZTQ9HBM0 779 aa27.49■■□□□ 1.99
APOE-201ENST00000252486 RHBDL3P58872 404 aa27.48■■□□□ 1.99
APOE-201ENST00000252486 MIGA1Q8NAN2 632 aa27.48■■□□□ 1.99
APOE-201ENST00000252486 PPP2R3BQ9Y5P8 575 aa27.48■■□□□ 1.99
APOE-201ENST00000252486 ZMYM1Q5SVZ6 1142 aa27.47■■□□□ 1.99
APOE-201ENST00000252486 KRT26Q7Z3Y9 468 aa27.47■■□□□ 1.99
APOE-201ENST00000252486 TEX11Q8IYF3 940 aa27.47■■□□□ 1.99
APOE-201ENST00000252486 IDI2Q9BXS1 227 aa27.47■■□□□ 1.99
APOE-201ENST00000252486 NPM3O75607 178 aaKnown RBP27.46■■□□□ 1.99
APOE-201ENST00000252486 FSTL1Q12841 308 aa27.46■■□□□ 1.99
APOE-201ENST00000252486 MAP1SQ66K74 1059 aaPredicted RBP27.46■■□□□ 1.99
APOE-201ENST00000252486 FAM83AQ86UY5 434 aa27.46■■□□□ 1.99
APOE-201ENST00000252486 AIDAQ96BJ3 306 aa27.46■■□□□ 1.99
APOE-201ENST00000252486 RIOK1Q9BRS2 568 aaKnown RBP27.46■■□□□ 1.99
APOE-201ENST00000252486 DIAPH3Q9NSV4 1193 aa27.46■■□□□ 1.99
APOE-201ENST00000252486 SH3RF3Q8TEJ3 882 aaPredicted RBP27.45■■□□□ 1.98
APOE-201ENST00000252486 HELLSQ9NRZ9 838 aa27.45■■□□□ 1.98
APOE-201ENST00000252486 MBD4O95243 580 aa27.44■■□□□ 1.98
APOE-201ENST00000252486 DYNLL1P63167 89 aaKnown RBP27.44■■□□□ 1.98
APOE-201ENST00000252486 SLFNL1Q499Z3 407 aa27.44■■□□□ 1.98
APOE-201ENST00000252486 OSBP2Q969R2 916 aa27.44■■□□□ 1.98
APOE-201ENST00000252486 CRNKL1Q9BZJ0 848 aaKnown RBP27.44■■□□□ 1.98
APOE-201ENST00000252486 PUS7LQ9H0K6 701 aaKnown RBP27.44■■□□□ 1.98
APOE-201ENST00000252486 TCP10L2B9ZVM9 353 aa27.43■■□□□ 1.98
APOE-201ENST00000252486 ENTPD3O75355 529 aa27.43■■□□□ 1.98
APOE-201ENST00000252486 WDHD1O75717 1129 aaPredicted RBP27.43■■□□□ 1.98
APOE-201ENST00000252486 CHGBP05060 677 aa27.43■■□□□ 1.98
APOE-201ENST00000252486 DEFB129Q9H1M3 183 aa27.43■■□□□ 1.98
APOE-201ENST00000252486 GNAT2P19087 354 aa27.42■■□□□ 1.98
APOE-201ENST00000252486 CACNB3P54284 484 aa27.42■■□□□ 1.98
APOE-201ENST00000252486 USP48Q86UV5 1035 aa27.42■■□□□ 1.98
APOE-201ENST00000252486 FAM151AQ8WW52 585 aa27.42■■□□□ 1.98
APOE-201ENST00000252486 POLR2AP24928 1970 aaKnown RBP27.42■■□□□ 1.98
APOE-201ENST00000252486 RASA3Q14644 834 aa27.41■■□□□ 1.98
APOE-201ENST00000252486 MCMDC2Q4G0Z9 681 aa27.41■■□□□ 1.98
APOE-201ENST00000252486 LCORLQ8N3X6 602 aa27.41■■□□□ 1.98
APOE-201ENST00000252486 GLIS2Q9BZE0 524 aaPredicted RBP27.41■■□□□ 1.98
APOE-201ENST00000252486 ARMT1Q9H993 441 aa27.41■■□□□ 1.98
APOE-201ENST00000252486 RPAP1Q9BWH6 1393 aaPredicted RBP27.4■■□□□ 1.98
APOE-201ENST00000252486 USP5P45974 858 aa27.4■■□□□ 1.98
APOE-201ENST00000252486 MFAP1P55081 439 aaKnown RBP27.4■■□□□ 1.98
APOE-201ENST00000252486 NFIAQ12857 509 aa27.4■■□□□ 1.98
APOE-201ENST00000252486 NMIQ13287 307 aaPredicted RBP27.4■■□□□ 1.98
APOE-201ENST00000252486 RUFY2Q8WXA3 655 aa27.4■■□□□ 1.98
APOE-201ENST00000252486 STRBPQ96SI9 672 aaKnown RBP27.4■■□□□ 1.98
APOE-201ENST00000252486 FAM198AQ9UFP1 575 aa27.4■■□□□ 1.98
APOE-201ENST00000252486 ADM5C9JUS6 153 aa27.39■■□□□ 1.98
APOE-201ENST00000252486 GPAA1O43292 621 aa27.39■■□□□ 1.98
APOE-201ENST00000252486 ITGBL1O95965 494 aaPredicted RBP27.39■■□□□ 1.98
APOE-201ENST00000252486 TGFBRAP1Q8WUH2 860 aa27.39■■□□□ 1.98
APOE-201ENST00000252486 COL2A1P02458 1487 aaPredicted RBP27.38■■□□□ 1.97
APOE-201ENST00000252486 CNTNAP1P78357 1384 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 M0R2C6 588 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 CHMLP26374 656 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 PICALMQ13492 652 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 HOOK2Q96ED9 719 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 DDRGK1Q96HY6 314 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 FAM227BQ96M60 508 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 ATP8A2Q9NTI2 1148 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 FOCADQ5VW36 1801 aa27.38■■□□□ 1.97
APOE-201ENST00000252486 A0A0D9SFI3 127 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms