RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 ADRA2BP18089 450 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
FOXA1-201ENST00000250448 RTL9Q8NET4 1388 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 BCAMP50895 628 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 IQCB1Q15051 598 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 SARM1Q6SZW1 724 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 CARMIL3Q8ND23 1372 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 GOLGA6L19H0YKK7 550 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 TPD52L1Q16890 204 aaPredicted RBP19.79■□□□□ 0.76
FOXA1-201ENST00000250448 PAXBP1Q9Y5B6 917 aa19.79■□□□□ 0.76
FOXA1-201ENST00000250448 C11orf57Q6ZUT1 292 aaPredicted RBP19.78■□□□□ 0.76
FOXA1-201ENST00000250448 RGL2O15211 777 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 SLC5A1P13866 664 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 STX1AQ16623 288 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 PRR5LQ6MZQ0 368 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 SMARCC2Q8TAQ2 1214 aa19.78■□□□□ 0.76
FOXA1-201ENST00000250448 TNRC6CQ9HCJ0 1690 aaKnown RBP19.78■□□□□ 0.76
FOXA1-201ENST00000250448 CCDC112Q8NEF3 446 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 FEZ1Q99689 392 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 PLSCR1O15162 318 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 CTAGE5O15320 804 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 DDR1Q08345 913 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 SCRN1Q12765 414 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 FBXO41Q8TF61 875 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 MRFAP1L1Q96HT8 127 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 MINPP1Q9UNW1 487 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 LAMA4Q16363 1823 aa19.77■□□□□ 0.76
FOXA1-201ENST00000250448 SERPINB2P05120 415 aa19.77■□□□□ 0.75
FOXA1-201ENST00000250448 CYP21A2P08686 494 aa19.77■□□□□ 0.75
FOXA1-201ENST00000250448 RPS8P62241 208 aaKnown RBP19.77■□□□□ 0.75
FOXA1-201ENST00000250448 COL23A1Q86Y22 540 aaPredicted RBP19.77■□□□□ 0.75
FOXA1-201ENST00000250448 LLPHQ9BRT6 129 aaKnown RBP19.77■□□□□ 0.75
FOXA1-201ENST00000250448 TM4SF1P30408 202 aa19.76■□□□□ 0.75
FOXA1-201ENST00000250448 CEBPZQ03701 1054 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 ADD1P35611 737 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 MCMDC2Q4G0Z9 681 aa19.76■□□□□ 0.75
FOXA1-201ENST00000250448 NAA16Q6N069 864 aaPredicted RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 CCAR1Q8IX12 1150 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 PIH1D3Q9NQM4 214 aaKnown RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 BSDC1Q9NW68 430 aaPredicted RBP19.76■□□□□ 0.75
FOXA1-201ENST00000250448 AKAP11Q9UKA4 1901 aa19.76■□□□□ 0.75
FOXA1-201ENST00000250448 NEMFO60524 1076 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 PFKFB2O60825 505 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 KLRK1P26718 216 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 GYG1P46976 350 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 LRRC8AQ8IWT6 810 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 LRRC2Q9BYS8 371 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 MYO5AQ9Y4I1 1855 aaKnown RBP19.75■□□□□ 0.75
FOXA1-201ENST00000250448 M0R2C6 588 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 RNF113AO15541 343 aaKnown RBP19.75■□□□□ 0.75
FOXA1-201ENST00000250448 RASGRF1Q13972 1273 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 MSL1Q68DK7 614 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 IPO4Q8TEX9 1081 aaKnown RBP19.75■□□□□ 0.75
FOXA1-201ENST00000250448 OSBP2Q969R2 916 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 RCOR1Q9UKL0 485 aa19.75■□□□□ 0.75
FOXA1-201ENST00000250448 IDH1O75874 414 aaKnown RBP19.74■□□□□ 0.75
FOXA1-201ENST00000250448 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
FOXA1-201ENST00000250448 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 NSUN7Q8NE18 718 aaKnown RBP19.74■□□□□ 0.75
FOXA1-201ENST00000250448 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 GOLPH3LQ9H4A5 285 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 FOSBP53539 338 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 CCDC73Q6ZRK6 1079 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 MAST3O60307 1309 aa19.74■□□□□ 0.75
FOXA1-201ENST00000250448 ZMYM1Q5SVZ6 1142 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 STOX1Q6ZVD7 989 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 CGNQ9P2M7 1197 aaKnown RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 OGFRQ9NZT2 677 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 CTNNA3Q9UI47 895 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 ARID5BQ14865 1188 aa19.73■□□□□ 0.75
FOXA1-201ENST00000250448 EZH2Q15910 746 aaKnown RBP19.73■□□□□ 0.75
FOXA1-201ENST00000250448 PTPDC1A2A3K4 754 aa19.72■□□□□ 0.75
FOXA1-201ENST00000250448 BECN2A8MW95 431 aa19.72■□□□□ 0.75
FOXA1-201ENST00000250448 KINO60870 393 aaKnown RBP19.72■□□□□ 0.75
FOXA1-201ENST00000250448 SPATA5Q8NB90 893 aa19.72■□□□□ 0.75
FOXA1-201ENST00000250448 PUS7LQ9H0K6 701 aaKnown RBP19.72■□□□□ 0.75
FOXA1-201ENST00000250448 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 CTDNEP1O95476 244 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 HMGB1P09429 215 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 NAA30Q147X3 362 aaPredicted RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 ZNF592Q92610 1267 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 USP28Q96RU2 1077 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 USP27XA6NNY8 438 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 SNW1Q13573 536 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 DHX32Q7L7V1 743 aaKnown RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 ZNF396Q96N95 335 aaPredicted RBP19.71■□□□□ 0.75
FOXA1-201ENST00000250448 ANO10Q9NW15 660 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
FOXA1-201ENST00000250448 KIF20AO95235 890 aa19.7■□□□□ 0.74
FOXA1-201ENST00000250448 DHX40Q8IX18 779 aaKnown RBP19.7■□□□□ 0.74
FOXA1-201ENST00000250448 UQCRFS1P1P0C7P4 283 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms