RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TPD52P55327 224 aaPredicted RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 DENND2CQ68D51 928 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 CCDC63Q8NA47 563 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 TRIM4Q9C037 500 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 A0A087WUV0 522 aaPredicted RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 BICD1Q96G01 975 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 UBE3BQ7Z3V4 1068 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 C17orf53Q8N3J3 647 aaPredicted RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 Q9H521 79 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 THOC2Q8NI27 1593 aaKnown RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 RBM5P52756 815 aaKnown RBP eCLIP9.19□□□□□ -0.941e-9■■□□□ 11.4
APOB-201ENST00000233242 INF2Q27J81 1249 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 SND1Q7KZF4 910 aaKnown RBP eCLIP9.19□□□□□ -0.942e-35■□□□□ 11
APOB-201ENST00000233242 TRIM58Q8NG06 486 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 MYO1AQ9UBC5 1043 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 ZNF215Q9UL58 517 aaPredicted RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 E7EVH7 732 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 ZNF622Q969S3 477 aaKnown RBP eCLIP9.19□□□□□ -0.94
APOB-201ENST00000233242 IMPG2Q9BZV3 1241 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 C6orf50Q9HD87 102 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 SSX2IPQ9Y2D8 614 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 KLHL14Q9P2G3 628 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 THEGQ9P2T0 379 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 CCDC25Q86WR0 208 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 TXNDC16Q9P2K2 825 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 RPS6KB1P23443 525 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 PPP2R5BQ15173 497 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 PAG1Q9NWQ8 432 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 HOMER3Q9NSC5 361 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 BAIAP2L1Q9UHR4 511 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 RRP15Q9Y3B9 282 aaKnown RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 CCDC97Q96F63 343 aaPredicted RBP9.19□□□□□ -0.94
APOB-201ENST00000233242 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 TM6SF1Q9BZW5 370 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
APOB-201ENST00000233242 FLOT1O75955 427 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 ARHGEF2Q92974 986 aaKnown RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 TCHPQ9BT92 498 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 GRM8O00222 908 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 PSMC4P43686 418 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 PLCB3Q01970 1234 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 PAK1Q13153 545 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 HSP90AA5PQ58FG0 334 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 SUDS3Q9H7L9 328 aaPredicted RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 ZNF202O95125 648 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 VPS52Q8N1B4 723 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 TACO1Q9BSH4 297 aaKnown RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 ZWINTO95229 277 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 MUM1Q2TAK8 710 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 GNGT1P63211 74 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 SLC9C1Q4G0N8 1177 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 P3H4Q92791 437 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 LRRD1A4D1F6 860 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 LGSNQ5TDP6 509 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 AFAP1L2Q8N4X5 818 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 TCEANC2Q96MN5 208 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 LRRC2Q9BYS8 371 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 RIPOR2Q9Y4F9 1068 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 RNF113AO15541 343 aaKnown RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 KRT71Q3SY84 523 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 NFE2L3Q9Y4A8 694 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 IQGAP2Q13576 1575 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 CETN3O15182 167 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 EEF2P13639 858 aaKnown RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 NOC4LQ9BVI4 516 aaKnown RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 HELLSQ9NRZ9 838 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 APBB1IPQ7Z5R6 666 aaPredicted RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 GBP7Q8N8V2 638 aaPredicted RBP9.18□□□□□ -0.94
APOB-201ENST00000233242 TMEM63CQ9P1W3 806 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 STK24Q9Y6E0 443 aa9.18□□□□□ -0.94
APOB-201ENST00000233242 SLMAPQ14BN4 828 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 DDX41Q9UJV9 622 aaKnown RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 CTNND2Q9UQB3 1225 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 STX17P56962 302 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 KIFAP3Q92845 792 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 ARID5AQ03989 594 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 RPS6KA1Q15418 735 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 DTHD1Q6ZMT9 781 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 JRKLQ9Y4A0 524 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 WASLO00401 505 aaPredicted RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 RGS16O15492 202 aaPredicted RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 NME9Q86XW9 330 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 ZNF131P52739 623 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 LINS1Q8NG48 757 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 RFC1P35251 1148 aaPredicted RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 KSR2Q6VAB6 950 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 TRMT112Q9UI30 125 aaKnown RBP9.17□□□□□ -0.94
APOB-201ENST00000233242 KRT9P35527 623 aa9.17□□□□□ -0.94
APOB-201ENST00000233242 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms