RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
NOD1-201ENST00000222823 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
NOD1-201ENST00000222823 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
NOD1-201ENST00000222823 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
NOD1-201ENST00000222823 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
NOD1-201ENST00000222823 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
NOD1-201ENST00000222823 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
NOD1-201ENST00000222823 TM6SF1Q9BZW5 370 aa13.07□□□□□ -0.32
NOD1-201ENST00000222823 PTGS1P23219 599 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 STX17P56962 302 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
NOD1-201ENST00000222823 APPBP2Q92624 585 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 RGS12O14924 1447 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 B4E1Z4 1266 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 SLC27A2O14975 620 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 PPP1R9BQ96SB3 815 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 PLCD4Q9BRC7 762 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 SLC52A2Q9HAB3 445 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
NOD1-201ENST00000222823 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
NOD1-201ENST00000222823 GCKRQ14397 625 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 TMEM63CQ9P1W3 806 aa13.06□□□□□ -0.32
NOD1-201ENST00000222823 PUF60Q9UHX1 559 aaKnown RBP13.06□□□□□ -0.32
NOD1-201ENST00000222823 CLTCQ00610 1675 aaKnown RBP13.06□□□□□ -0.32
NOD1-201ENST00000222823 SPDYE3A6NKU9 549 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
NOD1-201ENST00000222823 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 A0A1B0GVL5 298 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 MCM7P33993 719 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 USP37Q86T82 979 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 BICD1Q96G01 975 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 KIF2CQ99661 725 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 CD163L1Q9NR16 1453 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 GNPATO15228 680 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 CUL4AQ13619 759 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 TMEM87BQ96K49 555 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 KDRP35968 1356 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 KCNQ3O43525 872 aa13.05□□□□□ -0.32
NOD1-201ENST00000222823 PUM3Q15397 648 aaKnown RBP13.05□□□□□ -0.32
NOD1-201ENST00000222823 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 GCOM1H8Y6P7 765 aaPredicted RBP13.04□□□□□ -0.32
NOD1-201ENST00000222823 PDE8AO60658 829 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
NOD1-201ENST00000222823 CCDC175P0C221 793 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 KRT13P13646 458 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 CTR9Q6PD62 1173 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 DHX37Q8IY37 1157 aaKnown RBP13.04□□□□□ -0.32
NOD1-201ENST00000222823 IFNKQ9P0W0 207 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 GPAA1O43292 621 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 ANGEL1Q9UNK9 670 aaKnown RBP13.04□□□□□ -0.32
NOD1-201ENST00000222823 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 CCDC91Q7Z6B0 441 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 TBC1D5Q92609 795 aa13.04□□□□□ -0.32
NOD1-201ENST00000222823 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 CDCA7Q9BWT1 371 aaPredicted RBP13.03□□□□□ -0.32
NOD1-201ENST00000222823 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 CPS1P31327 1500 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 SHPRHQ149N8 1683 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
NOD1-201ENST00000222823 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 DRC1Q96MC2 740 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 TUBB4AP04350 444 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
NOD1-201ENST00000222823 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 EYA3Q99504 573 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 NCOA5Q9HCD5 579 aaKnown RBP13.03□□□□□ -0.32
NOD1-201ENST00000222823 TACC1O75410 805 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 HIBADHP31937 336 aaKnown RBP13.03□□□□□ -0.32
NOD1-201ENST00000222823 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 GPT2Q8TD30 523 aa13.03□□□□□ -0.32
NOD1-201ENST00000222823 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
NOD1-201ENST00000222823 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.32
NOD1-201ENST00000222823 FERMT2Q96AC1 680 aa13.02□□□□□ -0.32
NOD1-201ENST00000222823 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.32
NOD1-201ENST00000222823 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.32
NOD1-201ENST00000222823 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms