RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 A0A087WWV3 80 aa13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 PTH1RQ03431 593 aa13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 HDXQ7Z353 690 aa13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
DNMT3B-201ENST00000201963 GRM8O00222 908 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 ETF1P62495 437 aaKnown RBP13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 H0YIN7 160 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 CCDC129Q6ZRS4 1044 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 ARHGAP27Q6ZUM4 889 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
DNMT3B-201ENST00000201963 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 GNL3LQ9NVN8 582 aaKnown RBP13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ADGRB1O14514 1584 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 SETBP1Q9Y6X0 1596 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 MED14O60244 1454 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ATP2C2O75185 946 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 HLTFQ14527 1009 aaKnown RBP eCLIP13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 TERF2Q15554 542 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ADCK5Q3MIX3 580 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 MICALCLQ6ZW33 695 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 CAPZA3Q96KX2 299 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 NAPBQ9H115 298 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 MYO6Q9UM54 1294 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 FBXO38Q6PIJ6 1188 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 ERLIN2O94905 339 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
DNMT3B-201ENST00000201963 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 TAF4BQ92750 862 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 USO1O60763 962 aaKnown RBP13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 AOX1Q06278 1338 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 ATRIPQ8WXE1 791 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 DDX41Q9UJV9 622 aaKnown RBP13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
DNMT3B-201ENST00000201963 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 CT47A1Q5JQC4 288 aaPredicted RBP13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 ZHX3Q9H4I2 956 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 ZEB2O60315 1214 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 OSBPL3Q9H4L5 887 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 ZBTB22O15209 634 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 ARHGAP6O43182 974 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 PRC1O43663 620 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 ALDH1L1O75891 902 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 USP28Q96RU2 1077 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
DNMT3B-201ENST00000201963 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 SEC31AO94979 1220 aaKnown RBP13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 ZNF202O95125 648 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 SSBP05455 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 TDRD12Q587J7 1177 aaKnown RBP13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 RXRAP19793 462 aa13.1□□□□□ -0.31
DNMT3B-201ENST00000201963 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms