RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DDX11L8A8MPP1 907 aa23.26■■□□□ 1.31
TNFRSF1A-201ENST00000162749 MCM5P33992 734 aa23.26■■□□□ 1.31
TNFRSF1A-201ENST00000162749 ZDHHC9Q9Y397 364 aa23.26■■□□□ 1.31
TNFRSF1A-201ENST00000162749 TRDNQ13061 729 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 LAMB1P07942 1786 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 ANTXR2P58335 489 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 MFSD14BQ5SR56 506 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 NKX2-3Q8TAU0 364 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 BRPF3Q9ULD4 1205 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 NEDD4P46934 1319 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 FAM205AQ6ZU69 1335 aa23.25■■□□□ 1.31
TNFRSF1A-201ENST00000162749 CTDSPL2Q05D32 466 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 DIXDC1Q155Q3 683 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 C7orf43Q8WVR3 580 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 PRC1O43663 620 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 STK3Q13188 491 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 TBC1D22AQ8WUA7 517 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 SMC3Q9UQE7 1217 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 SCN9AQ15858 1988 aa23.24■■□□□ 1.31
TNFRSF1A-201ENST00000162749 WDR19Q8NEZ3 1342 aa23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 ILDR1Q86SU0 546 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GTF3C6Q969F1 213 aa23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 APOBRQ0VD83 1088 aa23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 INCENPQ9NQS7 918 aa23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 TACC3Q9Y6A5 838 aa23.23■■□□□ 1.31
TNFRSF1A-201ENST00000162749 B4E1Z4 1266 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 DTNBO60941 627 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GTF2IP78347 998 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GSTO1P78417 241 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 AKNAD1Q5T1N1 836 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GIMAP6Q6P9H5 292 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GBP4Q96PP9 640 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 EYA3Q99504 573 aa23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 CRNKL1Q9BZJ0 848 aaKnown RBP23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GPHNQ9NQX3 736 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF1A-201ENST00000162749 PPARAQ07869 468 aa23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 TCHHQ07283 1943 aa23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GJB2P29033 226 aa23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 DOK7Q18PE1 504 aa23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 CYB5R4Q7L1T6 521 aa23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 STAG1Q8WVM7 1258 aa23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 GZF1Q9H116 711 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1A-201ENST00000162749 ZNF646O15015 1829 aaPredicted RBP23.2■■□□□ 1.31
TNFRSF1A-201ENST00000162749 MROH7-TTC4A0A0A0MT08 1334 aa23.2■■□□□ 1.31
TNFRSF1A-201ENST00000162749 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 BRD1O95696 1058 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 PRKCSHP14314 528 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 EVCP57679 992 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CLEC17AQ6ZS10 378 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 MFSD6Q6ZSS7 791 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 RTFDC1Q9BY42 306 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 DCP1AQ9NPI6 582 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ANAPC4Q9UJX5 808 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 NAV1Q8NEY1 1877 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CNNM2Q9H8M5 875 aa23.2■■□□□ 1.3
TNFRSF1A-201ENST00000162749 MINDY4BA8MYZ0 360 aa23.19■■□□□ 1.3
TNFRSF1A-201ENST00000162749 PFKFB2O60825 505 aa23.19■■□□□ 1.3
TNFRSF1A-201ENST00000162749 SCRN1Q12765 414 aa23.19■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ATP8A2Q9NTI2 1148 aa23.19■■□□□ 1.3
TNFRSF1A-201ENST00000162749 SMIM22K7EJ46 135 aa23.18■■□□□ 1.3
TNFRSF1A-201ENST00000162749 LDHCP07864 332 aa23.18■■□□□ 1.3
TNFRSF1A-201ENST00000162749 PPP4CP60510 307 aa23.18■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ZNF274Q96GC6 653 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF1A-201ENST00000162749 UTRNP46939 3433 aa23.18■■□□□ 1.3
TNFRSF1A-201ENST00000162749 FOCADQ5VW36 1801 aa23.18■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CYP2D7A0A087X1C5 515 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 BAG3O95817 575 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 SYT1P21579 422 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 KCNA3P22001 575 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 PDIA3P30101 505 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CC2D2BQ6DHV5 1058 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CTR9Q6PD62 1173 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 KRT23Q9C075 422 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 DBNDD1Q9H9R9 158 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ZSWIM5Q9P217 1185 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 USP17L12C9JPN9 530 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 USP17L21D6R901 530 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 KDM4AO75164 1064 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 PODNQ7Z5L7 613 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 STK11IPQ8N1F8 1099 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CERS5Q8N5B7 392 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 TTLL6Q8N841 843 aa23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 RNF41Q9H4P4 317 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ANGEL1Q9UNK9 670 aaKnown RBP23.17■■□□□ 1.3
TNFRSF1A-201ENST00000162749 G3V3G9 751 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 C21orf2O43822 256 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 DPEP1P16444 411 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 DCAF8Q5TAQ9 597 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 SH3RF3Q8TEJ3 882 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 FBXW7Q969H0 707 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 BRCA1P38398 1863 aaKnown RBP23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 FSD2A1L4K1 749 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 BAG4O95429 457 aaKnown RBP23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 FAM163AQ96GL9 167 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 MTFR1LQ9H019 292 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms