RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 HEATR3Q7Z4Q2 680 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 NEDD1Q8NHV4 660 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 CNKSR1Q969H4 720 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 GOPCQ9HD26 462 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 EXOC1Q9NV70 894 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 WDR17Q8IZU2 1322 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 UBA7P41226 1012 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 KIAA1328Q86T90 577 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 TSPYL6Q8N831 410 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 KCNG4Q8TDN1 519 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 ALG1Q9BT22 464 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 UBA5Q9GZZ9 404 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 LGR6Q9HBX8 967 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 PA2G4Q9UQ80 394 aaKnown RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 LAMC1P11047 1609 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 KIF2AO00139 706 aaPredicted RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 ZSCAN12O43309 604 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 MCM4P33991 863 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 TMCO4Q5TGY1 634 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 Q6ZUG5 572 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 FSIP1Q8NA03 581 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 DDX17Q92841 729 aaKnown RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 XAGE2Q96GT9 111 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 AS3MTQ9HBK9 375 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 RAD18Q9NS91 495 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 ZBTB40Q9NUA8 1239 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 PNMA2Q9UL42 364 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 USP19O94966 1318 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 GLI2P10070 1586 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 KIF4AO95239 1232 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 CTSWP56202 376 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 CACNA2D4Q7Z3S7 1137 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 DNAJC10Q8IXB1 793 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 SYCP3Q8IZU3 236 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 ARHGEF1Q92888 912 aaKnown RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 TNPO1Q92973 898 aaKnown RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 TMEM87BQ96K49 555 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 ZC3H13Q5T200 1668 aaKnown RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 NCAPD2Q15021 1401 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 YEATS4O95619 227 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 PPP2R5BQ15173 497 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 NUDT18Q6ZVK8 323 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 KRT27Q7Z3Y8 459 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 ARHGEF25Q86VW2 580 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 CCDC144CPQ8IYA2 1237 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 DRC1Q96MC2 740 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 SPHKAPQ2M3C7 1700 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 CCDC85CA6NKD9 419 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 ERLIN1O75477 346 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 TIE1P35590 1138 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 TNFAIP1Q13829 316 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 ZRSR2Q15696 482 aaKnown RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 PKDCCQ504Y2 493 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 CCDC102BQ68D86 513 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 ATL3Q6DD88 541 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 C2CD5Q86YS7 1000 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 DHX37Q8IY37 1157 aaKnown RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 BICD1Q96G01 975 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 CAMSAP1Q5T5Y3 1602 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 A0A1B0GUL7 405 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 GOLGA6L10A6NI86 522 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 GALR2O43603 387 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 NEMFO60524 1076 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 DKC1O60832 514 aaKnown RBP eCLIP4.84□□□□□ -1.63
CFTR-201ENST00000003084 TNNT3P45378 269 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 RGS22Q8NE09 1264 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 IQSEC3Q9UPP2 1182 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 RNF123Q5XPI4 1314 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 CDK12Q9NYV4 1490 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 ZBTB7BO15156 539 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 ZBED4O75132 1171 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 PCCAP05165 728 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 ZSCAN22P10073 491 aaPredicted RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 CCDC40Q4G0X9 1142 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 MTERF4Q7Z6M4 381 aaKnown RBP4.84□□□□□ -1.63
CFTR-201ENST00000003084 RNF135Q8IUD6 432 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 CCDC82Q8N4S0 544 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 BRF1Q92994 677 aa4.84□□□□□ -1.63
CFTR-201ENST00000003084 MAP3K15Q6ZN16 1313 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 H7C1D1 291 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 MBD4O95243 580 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 BMP2P12643 396 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 GUCY1B3Q02153 619 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 PLS1Q14651 629 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 CFAP100Q494V2 611 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 MCTP2Q6DN12 878 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 CCDC174Q6PII3 467 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 DHX32Q7L7V1 743 aaKnown RBP4.84□□□□□ -1.64
CFTR-201ENST00000003084 ZBTB38Q8NAP3 1195 aaPredicted RBP4.84□□□□□ -1.64
CFTR-201ENST00000003084 SPATA5Q8NB90 893 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 SNX21Q969T3 373 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 CTAGE1Q96RT6 745 aa4.84□□□□□ -1.64
CFTR-201ENST00000003084 ANKRD62A6NC57 917 aa4.83□□□□□ -1.64
CFTR-201ENST00000003084 NEURL1BA8MQ27 555 aa4.83□□□□□ -1.64
CFTR-201ENST00000003084 USO1O60763 962 aaKnown RBP4.83□□□□□ -1.64
CFTR-201ENST00000003084 A1BGP04217 495 aa4.83□□□□□ -1.64
CFTR-201ENST00000003084 HCLS1P14317 486 aaPredicted RBP4.83□□□□□ -1.64
CFTR-201ENST00000003084 IL6STP40189 918 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms