RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Epb41l3Q9WV92 929 aa24.99■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Myh6Q02566 1938 aaKnown RBP24.99■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Eddm13E9Q7F5 164 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 AaasP58742 546 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 BrapQ99MP8 591 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Pik3ap1Q9EQ32 811 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Gtf2iQ9ESZ8 998 aaKnown RBP24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Med23Q80YQ2 1367 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Scn9aQ62205 1984 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Stat1P42225 749 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 AsnsQ61024 561 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Nell2Q61220 819 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Glis3Q6XP49 780 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Cep55Q8BT07 462 aa24.98■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Ehmt1Q5DW34 1296 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 CbarpQ66L44 698 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Olfr118Q7TRJ6 321 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Fsd2Q8BZ52 692 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Znf428Q8C1M2 176 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Ly6iQ9WU67 134 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Mtmr2Q9Z2D1 643 aa24.97■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Cd3dP04235 173 aa24.96■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 CfhP06909 1234 aa24.96■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Cnnm2Q3TWN3 875 aa24.96■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Adck5Q80V03 582 aa24.96■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Znf18Q810A1 556 aa24.96■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Antxr1Q9CZ52 562 aa24.96■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Eef2kO08796 724 aa24.95■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Ccdc174Q3U155 467 aa24.95■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Ttc12Q8BW49 704 aa24.95■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Psme4Q5SSW2 1843 aa24.95■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Megf6Q80V70 1572 aa24.95■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Kifc2O08672 792 aa24.95■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 FanccP50652 591 aa24.95■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Gm45015A0A140LII9 184 aa24.94■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Gm18336A0A140LIU8 765 aa24.94■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Lipo1J3QME6 396 aa24.94■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Bnip3O55003 187 aa24.94■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Rnf41Q8BH75 317 aa24.94■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Sil1Q9EPK6 465 aa24.94■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Pde11aP0C1Q2 933 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Ppp4cP97470 307 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Gas1Q01721 343 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Psmd1Q3TXS7 953 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Q3TYL0 343 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Rnf180Q3U827 592 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 MlphQ91V27 590 aa24.93■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Adam7O35227 789 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Zdhhc9P59268 364 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 HelbQ6NVF4 1074 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Slc44a1Q6X893 653 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Iffo2Q8R2V2 512 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Ctr9Q62018 1173 aaKnown RBP24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 ParnQ8VDG3 624 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Bloc1s4Q8VED2 215 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Gpr108Q91WD0 569 aa24.92■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Tnni2P13412 182 aa24.91■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Zc3h15Q3TIV5 426 aaKnown RBP24.91■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Ctdnep1Q3TP92 244 aa24.91■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 NogP97466 232 aa24.9■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Tsr2Q8C8T8 191 aa24.9■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Ccdc39Q9D5Y1 937 aa24.9■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Zfp804bA0A0G2JGH6 1343 aa24.9■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Dock5B2RY04 1868 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Prss40A6H6T1 365 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Spata5Q3UMC0 893 aaKnown RBP24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Prdm1Q60636 856 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Stn1Q8K2X3 378 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Rufy2Q8R4C2 606 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Gripap1Q8VD04 806 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Pcdhb5Q91XZ5 792 aa24.89■■□□□ 1.58
Ccdc88a-202ENSMUST00000109477 Pde6aP27664 859 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 PcQ05920 1178 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Mum1l1Q4VA55 681 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Fsd1Q7TPM6 496 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Tbc1d23Q8K0F1 684 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Nfe2l3Q9WTM4 660 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Aox1O54754 1333 aa24.89■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Akap2O54931 893 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Lamb1P02469 1786 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ddit3P35639 168 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Fam170aQ66LM6 333 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ddx31Q6NZQ2 687 aaKnown RBP24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Mboat7Q8CHK3 473 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Bap1Q99PU7 728 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ripk4Q9ERK0 786 aa24.88■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Glt1d1A4FUP9 346 aa24.87■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Abl1P00520 1123 aa24.87■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Cep57l1Q8VDS7 400 aa24.87■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Hps4Q99KG7 671 aa24.87■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Bloc1s2Q9CWG9 143 aa24.87■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Tsc2Q61037 1814 aa24.87■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Tor1aip2Q8BYU6 502 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Rasa1E9PYG6 1038 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Ifi207E9Q3L4 978 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Psmd14O35593 310 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Cct2P80314 535 aaKnown RBP24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Rpusd2Q149F1 553 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Map9Q3TRR0 646 aa24.86■■□□□ 1.57
Ccdc88a-202ENSMUST00000109477 Tmem59lQ7TNI2 337 aa24.86■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms