RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A0A1B0GXF2 115 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
PHGDH-233ENST00000642021 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-233ENST00000642021 SPATA12Q7Z6I5 190 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 TXN2Q99757 166 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 ZGRF1Q86YA3 2104 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 FAM181BA6NEQ2 426 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 SH2D7A6NKC9 451 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-233ENST00000642021 M0QZ24 198 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-233ENST00000642021 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 RNASEKQ6P5S7 137 aaKnown RBP11.06□□□□□ -0.64
PHGDH-233ENST00000642021 GTSF1Q8WW33 167 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 GPR82Q96P67 336 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 ZNF292O60281 2723 aa11.06□□□□□ -0.64
PHGDH-233ENST00000642021 RIF1Q5UIP0 2472 aaKnown RBP11.06□□□□□ -0.64
PHGDH-233ENST00000642021 VSTM5A8MXK1 200 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 M0R2Z0 102 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 OR2J3O76001 311 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 PERPQ96FX8 193 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 CCL25O15444 150 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 IGHV1-8P0DP01 117 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 ZNF137PP52743 207 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 PMCHL1Q16048 86 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 TMEM155Q4W5P6 130 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 Q56UQ5 140 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 FAM71F2Q6NXP2 309 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 IGF2-ASQ6U949 168 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 ZFP30Q9Y2G7 519 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 NDUFB8O95169 186 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 FOXA3P55318 350 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-233ENST00000642021 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 LAMTOR2Q9Y2Q5 125 aa11.05□□□□□ -0.64
PHGDH-233ENST00000642021 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 GP9P14770 177 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 NHLH1Q02575 133 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 PVRIGQ6DKI7 326 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 SSX8Q7RTT4 187 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 OR8B3Q8NGG8 313 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 OR8B2Q96RD0 313 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 TPRP12270 2363 aaKnown RBP11.04□□□□□ -0.64
PHGDH-233ENST00000642021 ACACAQ13085 2346 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-233ENST00000642021 MC5RP33032 325 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 HNRNPA3P51991 378 aaKnown RBP11.04□□□□□ -0.64
PHGDH-233ENST00000642021 TMEM116Q8NCL8 245 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 TRGV9Q99603 122 aa11.04□□□□□ -0.64
PHGDH-233ENST00000642021 LGALS7P47929 136 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 RNASE6Q93091 150 aaKnown RBP11.03□□□□□ -0.64
PHGDH-233ENST00000642021 PGLYRP4Q96LB8 373 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 CHRDL1Q9BU40 450 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 Q9H3A6 140 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
PHGDH-233ENST00000642021 RELNP78509 3460 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 C19orf71A6NCJ1 209 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 TCRAP04437 139 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 RPL27AP46776 148 aaKnown RBP11.03□□□□□ -0.64
PHGDH-233ENST00000642021 Q6ZVH6 145 aa11.03□□□□□ -0.64
PHGDH-233ENST00000642021 TOMM40O96008 361 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 LTAP01374 205 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 CRYGBP07316 175 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 IGLL1P15814 213 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 TSPOP30536 169 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 ATP5L2Q7Z4Y8 100 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 TP73-AS1Q9UF72 201 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.64
PHGDH-233ENST00000642021 APC2O95996 2303 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 MALRD1Q5VYJ5 2156 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 POLEQ07864 2286 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 TOX4O94842 621 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 CA7P43166 264 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 HBBP68871 147 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 FAM120AOSQ5T036 256 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 TMEM133Q9H2Q1 129 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
PHGDH-233ENST00000642021 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-233ENST00000642021 KLK10O43240 276 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 KLHDC1Q8N7A1 406 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 TEX45Q8NA69 505 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 C5orf17Q8NAS9 161 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 C8orf46Q8TAG6 207 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 SIGLEC9Q9Y336 463 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 P01737 135 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 HINT1P49773 126 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-233ENST00000642021 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-233ENST00000642021 KAAG1Q9UBP8 84 aa11.01□□□□□ -0.65
PHGDH-233ENST00000642021 TRAV9-2A0A087WT02 112 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 A8MWL6 223 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 TEX22C9J3V5 150 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 E7EQL1 145 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms