RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 IGFL2Q6UWQ7 119 aa6.97□□□□□ -1.29
HNRNPU-219ENST00000639628 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
HNRNPU-219ENST00000639628 LSM4Q9Y4Z0 139 aaKnown RBP6.97□□□□□ -1.29
HNRNPU-219ENST00000639628 V9GYV3 84 aa6.97□□□□□ -1.29
HNRNPU-219ENST00000639628 ABCA1O95477 2261 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 FABP5P3A8MUU1 101 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 GGTLC3B5MD39 225 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 CD33P20138 364 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 RPL24P83731 157 aaKnown RBP6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 TM4SF20Q53R12 229 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 TPTE2P1Q5T6R2 138 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 ZNF841Q6ZN19 808 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 ST6GALNAC6Q969X2 333 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 SRSF8Q9BRL6 282 aaKnown RBP6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 PHLDA3Q9Y5J5 127 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 FAM215AQ9Y5M1 114 aa6.96□□□□□ -1.29
HNRNPU-219ENST00000639628 A1L4Q6 167 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 CD24P25063 80 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 PDLIM4P50479 330 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 LYPD1Q8N2G4 141 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 EXOC3-AS1Q8N2X6 119 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 LINC00479Q96M42 142 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 C20orf144Q9BQM9 153 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 ST20Q9HBF5 79 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 POLR3KQ9Y2Y1 108 aaPredicted RBP6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 A0A1B0GUS0 222 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 PEF1Q9UBV8 284 aaKnown RBP6.96□□□□□ -1.3
HNRNPU-219ENST00000639628 IGHV3OR16-13A0A075B7E8 117 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 IGHV3-74A0A0B4J1X5 117 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 THBDP07204 575 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 FABP2P12104 132 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 DMRTA1Q5VZB9 504 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 AKAP6Q13023 2319 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 EML6Q6ZMW3 1958 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 OOSP1A8MZH6 123 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 MMP23AO75900 390 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 SCGB1C2P0DMR2 95 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 FAM231DQ6ZW35 169 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 PIP4P1Q86T03 277 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 ASCL2Q99929 193 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 TTC28Q96AY4 2481 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 TECTAO75443 2155 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 MUC21A0A0G2JKD1 596 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 MUC21A0A140T8X8 626 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 GCSHP23434 173 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 MUC21Q5SSG8 566 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 WFDC3Q8IUB2 231 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 SLC25A2Q9BXI2 301 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 DNAH12Q6ZR08 3092 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 A0A1B0GV72 72 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 E7EQL1 145 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 TRGV3P03979 118 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 Q1RN00 199 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
HNRNPU-219ENST00000639628 IGHV3OR16-8A0A075B7F1 116 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 A0A1W2PNU3 283 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 SRRM4A7MD48 611 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 LHBP01229 141 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 PPBPP02775 128 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 WT1-ASQ06250 92 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 FAM106AQ4KMX7 169 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 CT83Q5H943 113 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 CEP192Q8TEP8 1941 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 C7orf71A4D174 169 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 ATP5LO75964 103 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 HBDP02042 147 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 RPL15P61313 204 aaKnown RBP6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 C5orf64Q2M2E5 130 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 CLEC19AQ6UXS0 136 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 ZNF492Q9P255 531 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 UTRNP46939 3433 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 ABCA4P78363 2273 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 FAM231BA6NCW3 169 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 M0R1W7 72 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 LOXP28300 417 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 ZNF124Q15973 351 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 Q86TA4 180 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 ODF3L1Q8IXM7 274 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 C18orf15Q96N68 181 aa6.94□□□□□ -1.3
HNRNPU-219ENST00000639628 EREGO14944 169 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 MINOS1Q5TGZ0 78 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 C18orf32Q8TCD1 76 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 MS4A6AQ9H2W1 248 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 MINOS1-NBL1R4GNA1 71 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 PLCE1Q9P212 2302 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 IGHV3-49A0A0A0MS15 119 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 TRAV8-1A0A0A6YYK1 113 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 SMIM27A0A1W2PRY6 76 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 RHOGP84095 191 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 EBLN2Q6P2I7 272 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 DKK4Q9UBT3 224 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 COL6A6A6NMZ7 2263 aa6.93□□□□□ -1.3
HNRNPU-219ENST00000639628 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms