RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 SEC11AP67812 179 aa14.38□□□□□ -0.11
CACNA1A-215ENST00000635727 BCL6BQ8N143 479 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-215ENST00000635727 ZNF525Q8N782 197 aa14.38□□□□□ -0.11
CACNA1A-215ENST00000635727 SCRT2Q9NQ03 307 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 OCC1Q8TAD7 63 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 MORN5Q5VZ52 161 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 TMEM256Q8N2U0 113 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 Q96MF0 132 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 CEACAM1P13688 526 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 IGF2BP2-AS1Q96M15 143 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 PSG1P11464 419 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 DEFB131AP59861 70 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 RPL18AQ02543 176 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 CSRP2Q16527 193 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 ALS2Q96Q42 1657 aa14.37□□□□□ -0.11
CACNA1A-215ENST00000635727 IGHV1-18A0A0C4DH31 117 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A10PA6NDY2 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A18PA6NE21 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A16PA6NEW6 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A20PA6NIJ5 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A8PA6NJQ4 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A7PA6NKC0 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A22PA8MWA6 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A12PA8MX19 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A5PA8MXJ8 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A23PA8MXZ1 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 SH2D1AO60880 128 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A15PP0C7V4 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A13PP0C7W8 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A14PP0C7W9 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A24PP0C7X0 464 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 FOXG1P55316 489 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 SDK2Q58EX2 2172 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 TRAV12-2A0A075B6T6 113 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 A0A0J9YY99 117 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 IFITM3Q01628 133 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 TIMM21Q9BVV7 248 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 PLAC1Q9HBJ0 212 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 SPINK13Q1W4C9 94 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 TMEM200BQ69YZ2 307 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 VSIRQ9H7M9 311 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 CHCHD2Q9Y6H1 151 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 PSG3Q16557 428 aa14.36□□□□□ -0.11
CACNA1A-215ENST00000635727 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 C15orf61A6NNL5 157 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 ERVH48-1M5A8F1 160 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 OVOL1O14753 267 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 GUSBP1Q15486 140 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 IGKV1D-13A0A0B4J2D9 117 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 SRP19P09132 144 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 IGKV1-13P0DP09 117 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 KLF5Q13887 457 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 ZNF672Q499Z4 452 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 FAM90A2PQ658T7 463 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 RTBDNQ9BSG5 229 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 PTPRDP23468 1912 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 XIRP1Q702N8 1843 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 IGKV1-5P01602 117 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 PCNX2A6NKB5 2137 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 ABCA1O95477 2261 aa14.35□□□□□ -0.11
CACNA1A-215ENST00000635727 GAS1P54826 345 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 TMEM158Q8WZ71 300 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 MYLKQ15746 1914 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 LINC00205P59089 165 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 Q6AWC8 147 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 DNAJC30Q96LL9 226 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 ZGRF1Q86YA3 2104 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 TRBV5-7A0A0A0MS05 114 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 C9orf153Q5TBE3 101 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 NR2C2APQ86WQ0 139 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 EFNB3Q15768 340 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 PVRIGQ6DKI7 326 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 PPP1R3EQ9H7J1 279 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 IGKV2D-24A0A075B6R9 120 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 C5orf24Q7Z6I8 188 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 MGST2Q99735 147 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 ZMAT4Q9H898 229 aa14.34□□□□□ -0.11
CACNA1A-215ENST00000635727 DTX1Q86Y01 620 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 DSCR8Q96T75 97 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 PRCDQ00LT1 54 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 A0A1W2PRE2 83 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 CD5P06127 495 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 LCN12Q6JVE5 192 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 SCN4AP35499 1836 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 F2Z2F3 143 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 NDUFAF3Q9BU61 184 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 IGKV1-39P01597 117 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 IGKV1D-39P04432 117 aa14.33□□□□□ -0.12
CACNA1A-215ENST00000635727 SMIM2Q9BVW6 85 aa14.32□□□□□ -0.12
CACNA1A-215ENST00000635727 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
CACNA1A-215ENST00000635727 AZU1P20160 251 aa14.32□□□□□ -0.12
CACNA1A-215ENST00000635727 Q0VFX4 171 aa14.32□□□□□ -0.12
CACNA1A-215ENST00000635727 IQCF6A8MYZ5 107 aa14.32□□□□□ -0.12
CACNA1A-215ENST00000635727 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
CACNA1A-215ENST00000635727 PINLYPA6NC86 204 aa14.31□□□□□ -0.12
CACNA1A-215ENST00000635727 PSPNO60542 156 aa14.31□□□□□ -0.12
CACNA1A-215ENST00000635727 Q6ZQT7 251 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms