RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KRTAP10-3P60369 221 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 AWAT1Q58HT5 328 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 OR10G4Q8NGN3 311 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 OR10G9Q8NGN4 311 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 OR10G7Q8NGN6 311 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 OR1B1Q8NGR6 318 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 SMDT1Q9H4I9 107 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
PTCHD3-202ENST00000622555 COX7A2P2O60397 106 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 OR5G3P0C626 314 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 ZNF414Q96IQ9 312 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 IGHV4OR15-8A0A075B7B6 117 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 A0A087WW49 117 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 WI2-2373I1.2A0A1W2PRP0 233 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 HYPMO75409 117 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 HSPB1P04792 205 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 H2AFB1P0C5Y9 115 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 CCL20P78556 96 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 TOMM20LQ6UXN7 152 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 OR1L4Q8NGR5 311 aa13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 TMA7Q9Y2S6 64 aaKnown RBP13.7□□□□□ -0.22
PTCHD3-202ENST00000622555 PLP1P60201 277 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 FAM122CQ6P4D5 195 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 C8orf86Q6ZUL3 223 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 MBD3L1Q8WWY6 194 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 TMEM37Q8WXS4 190 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 RCC1LQ96I51 464 aaKnown RBP13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 PFDN5Q99471 154 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 DNAJC4Q9NNZ3 241 aa13.69□□□□□ -0.22
PTCHD3-202ENST00000622555 NDUFA4O00483 81 aa13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 USF2Q15853 346 aaPredicted RBP13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 PATE2Q6UY27 113 aa13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 RPP25LQ8N5L8 163 aaKnown RBP13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 GATAD1Q8WUU5 269 aa13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 C19orf24Q9BVV8 132 aa13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 HIGD1AQ9Y241 93 aa13.68□□□□□ -0.22
PTCHD3-202ENST00000622555 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 HBE1P02100 147 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 RHOBP62745 196 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 FAM78BQ5VT40 261 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 OR11H1Q8NG94 326 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 OR1N2Q8NGR9 330 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 DPF1Q92782 380 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 C20orf24Q9BUV8 137 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 ACTR3CQ9C0K3 210 aaPredicted RBP13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 LINC01619G3V211 115 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 SNAPINO95295 136 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 CDC34P49427 236 aaPredicted RBP13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 DUX3Q96PT4 197 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 UHRF2Q96PU4 802 aa13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 SEPSECSQ9HD40 501 aaKnown RBP13.67□□□□□ -0.22
PTCHD3-202ENST00000622555 ZNF320A2RRD8 509 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 FAM74A7A6NL05 159 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 EIF3GO75821 320 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 HOXD3P31249 432 aaPredicted RBP13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 FAM74A3Q4VXF1 159 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 SPATA31B1PQ5VZV4 182 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 UNQ9165/PRO28630Q6UXU0 137 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 GPHB5Q86YW7 130 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 RNF2Q99496 336 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 EIF5A2Q9GZV4 153 aaKnown RBP13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 MRPL27Q9P0M9 148 aaKnown RBP13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 RABAC1Q9UI14 185 aa13.66□□□□□ -0.22
PTCHD3-202ENST00000622555 RBFOX3A6NFN3 312 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 SEC14L6B5MCN3 397 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 ZNF726P1Q15940 193 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 SSX7Q7RTT5 188 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 TMEM190Q8WZ59 177 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 RAB24Q969Q5 203 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 RAX2Q96IS3 184 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 SLC35B3Q9H1N7 401 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 FUT9Q9Y231 359 aa13.65□□□□□ -0.22
PTCHD3-202ENST00000622555 CTXND1A0A1B0GTU2 59 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 ADARB2-AS1A8MUL3 147 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 HMGB3O15347 200 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 PPT1P50897 306 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 PMS2P11Q13670 270 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 MIR17HGQ75NE6 70 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 SFT2D1Q8WV19 159 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 MRPL32Q9BYC8 188 aaKnown RBP13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 SLURP1P55000 103 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 MORN5Q5VZ52 161 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 LCN15Q6UWW0 184 aa13.64□□□□□ -0.23
PTCHD3-202ENST00000622555 CLRN3Q8NCR9 226 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms