RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 KIR3DL3Q8N743 410 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 RAXQ9Y2V3 346 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.61
CNOT3-210ENST00000618939 HTN1P15515 57 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 RPL24P83731 157 aaKnown RBP11.27□□□□□ -0.61
CNOT3-210ENST00000618939 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
CNOT3-210ENST00000618939 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
CNOT3-210ENST00000618939 KLF17Q5JT82 389 aaPredicted RBP11.26□□□□□ -0.61
CNOT3-210ENST00000618939 C11orf1Q9H5F2 150 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 C18orf15Q96N68 181 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 NUDT3O95989 172 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 GPX1P07203 203 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 Q1RN00 199 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
CNOT3-210ENST00000618939 EML6Q6ZMW3 1958 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 KLRD1Q13241 179 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 COL8A2P25067 703 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 GAGE10A6NGK3 116 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 SRSF9Q13242 221 aaKnown RBP eCLIP11.25□□□□□ -0.61
CNOT3-210ENST00000618939 MED12LQ86YW9 2145 aa11.25□□□□□ -0.61
CNOT3-210ENST00000618939 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
CNOT3-210ENST00000618939 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 GCSHP23434 173 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 RHOGP84095 191 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 C7orf71A4D174 169 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
CNOT3-210ENST00000618939 IGLV2-14P01704 120 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
CNOT3-210ENST00000618939 TMEM249Q2WGJ8 235 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 FAM106AQ4KMX7 169 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 IGFL2Q6UWQ7 119 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 C11orf52Q96A22 123 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 LY6HO94772 140 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 C3orf79P0CE67 100 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 LOXP28300 417 aaPredicted RBP11.24□□□□□ -0.61
CNOT3-210ENST00000618939 PRR20EP86478 221 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 PRR20CP86479 221 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 PRR20DP86480 221 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 PRR20BP86481 221 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 PRR20AP86496 221 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
CNOT3-210ENST00000618939 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
CNOT3-210ENST00000618939 SNAI2O43623 268 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 YPEL3P61236 119 aaPredicted RBP11.23□□□□□ -0.61
CNOT3-210ENST00000618939 C5orf64Q2M2E5 130 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 DKK4Q9UBT3 224 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 NUP210LQ5VU65 1888 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 K7ERU9 68 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 Q0VG73 95 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 PRR30Q53SZ7 412 aaPredicted RBP11.23□□□□□ -0.61
CNOT3-210ENST00000618939 LOC102724200A0A096LPH7 203 aaPredicted RBP11.23□□□□□ -0.61
CNOT3-210ENST00000618939 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 RAB37Q96AX2 223 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 A8MWP6 167 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
CNOT3-210ENST00000618939 CYB5R2Q6BCY4 276 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 LCN12Q6JVE5 192 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
CNOT3-210ENST00000618939 A1L4Q6 167 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 TOMM40O96008 361 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 V9GYV3 84 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 LINC00311Q8N616 119 aa11.22□□□□□ -0.61
CNOT3-210ENST00000618939 M0R381 172 aa11.21□□□□□ -0.61
CNOT3-210ENST00000618939 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.61
CNOT3-210ENST00000618939 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.61
CNOT3-210ENST00000618939 LSM4Q9Y4Z0 139 aaKnown RBP11.21□□□□□ -0.61
CNOT3-210ENST00000618939 LYRM7Q5U5X0 104 aa11.21□□□□□ -0.61
CNOT3-210ENST00000618939 LRP4O75096 1905 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 CNTFRP26992 372 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 DLX1P56177 255 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 C5orf30Q96GV9 206 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 ASCL2Q99929 193 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 SLC25A2Q9BXI2 301 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 CCL19Q99731 98 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.62
CNOT3-210ENST00000618939 ATRXP46100 2492 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 NPIPB5A8MRT5 1133 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 NUTF2P61970 127 aaKnown RBP11.2□□□□□ -0.62
CNOT3-210ENST00000618939 DIAPH2-AS1Q14236 149 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 TPSG1Q9NRR2 321 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms