RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CENPWQ5EE01 88 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 C19orf24Q9BVV8 132 aa13.83□□□□□ -0.2
CNOT3-209ENST00000617930 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
CNOT3-209ENST00000617930 HELTA6NFD8 242 aa13.82□□□□□ -0.2
CNOT3-209ENST00000617930 NDUFS8O00217 210 aa13.82□□□□□ -0.2
CNOT3-209ENST00000617930 CRYBB3P26998 211 aa13.82□□□□□ -0.2
CNOT3-209ENST00000617930 CX3CL1P78423 397 aa13.82□□□□□ -0.2
CNOT3-209ENST00000617930 PQLC2Q6ZP29 291 aa13.82□□□□□ -0.2
CNOT3-209ENST00000617930 K7EIM0 57 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 SAA4P35542 130 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 OR5I1Q13606 314 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 MS4A10Q96PG2 267 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 TRGV9Q99603 122 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 NDUFAF3Q9BU61 184 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 POLR3KQ9Y2Y1 108 aaPredicted RBP13.81□□□□□ -0.2
CNOT3-209ENST00000617930 OOSP1A8MZH6 123 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 GGTLC3B5MD39 225 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 PYYP10082 97 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 CCDC144NLQ6NUI1 221 aa13.81□□□□□ -0.2
CNOT3-209ENST00000617930 CENPVL3A0A0U1RRI6 287 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 NUPR1O60356 82 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 SELENOTP62341 195 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 C10orf113Q5VZT2 155 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 NCBP2LA6PVI3 153 aaKnown RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 COX7A2P2O60397 106 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 IGLC1P0CG04 106 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 CRISP2P16562 243 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 IER3P46695 156 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 TPPP2P59282 170 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 RPL19P84098 196 aaKnown RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 USF2Q15853 346 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 TIGITQ495A1 244 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF562Q6V9R5 426 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 KRTAP1-3Q8IUG1 177 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 OR5AU1Q8NGC0 362 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 SRSF8Q9BRL6 282 aaKnown RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 MRPL32Q9BYC8 188 aaKnown RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 NAGKQ9UJ70 344 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 TBL2Q9Y4P3 447 aaKnown RBP13.8□□□□□ -0.2
CNOT3-209ENST00000617930 V9GYV3 84 aa13.8□□□□□ -0.2
CNOT3-209ENST00000617930 PDZD2O15018 2839 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 SNURFLB1AK76 121 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 ORM2P19652 201 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 PAX8Q06710 450 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 LBHQ53QV2 105 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-209ENST00000617930 LINC00305Q7Z4B0 112 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 Q8N9W7 124 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 MAPK1IP1LQ8NDC0 245 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 FANCD2OSQ96PS1 177 aa13.79□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF705FA8MVS1 300 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-209ENST00000617930 CORTO00230 105 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 IGKV1-17P01599 117 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF705DP0CH99 300 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-209ENST00000617930 ZNF705BP0CI00 300 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-209ENST00000617930 RAB4BP61018 213 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 S4R3C0 116 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 IGHV3OR16-10A0A075B7F0 116 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 TRBV9A0A0B4J1U6 114 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 TMEM11P17152 192 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 OR1B1Q8NGR6 318 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 FXYD5Q96DB9 178 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 CR1P17927 2039 aa13.78□□□□□ -0.2
CNOT3-209ENST00000617930 IGHV7-81A0A0B4J1V7 117 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 TAS2R60P59551 318 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 PAFAH1B2P68402 229 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 DEFB113Q30KQ7 82 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 BAGE3Q86Y29 109 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 BAGE2Q86Y30 109 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 OR1L4Q8NGR5 311 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 RNF2Q99496 336 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 HSPB9Q9BQS6 159 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 C2orf88Q9BSF0 95 aa13.77□□□□□ -0.21
CNOT3-209ENST00000617930 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.21
CNOT3-209ENST00000617930 NPFFO15130 113 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 MGST1P10620 155 aaKnown RBP13.76□□□□□ -0.21
CNOT3-209ENST00000617930 PSG1P11464 419 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 SSTP61278 116 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 RANP62826 216 aaKnown RBP13.76□□□□□ -0.21
CNOT3-209ENST00000617930 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
CNOT3-209ENST00000617930 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
CNOT3-209ENST00000617930 ARPC1AQ92747 370 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 RNASE7Q9H1E1 156 aaKnown RBP13.76□□□□□ -0.21
CNOT3-209ENST00000617930 TP53TG3Q9ULZ0 132 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.76□□□□□ -0.214e-7■□□□□ 11.3
CNOT3-209ENST00000617930 ITPR2Q14571 2701 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 A0A1W2PRE2 83 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 SERF1AO75920 110 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 OSTCQ9NRP0 149 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 SOX21Q9Y651 276 aaPredicted RBP13.76□□□□□ -0.21
CNOT3-209ENST00000617930 UNC79Q9P2D8 2635 aa13.76□□□□□ -0.21
CNOT3-209ENST00000617930 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
CNOT3-209ENST00000617930 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
CNOT3-209ENST00000617930 PLP1P60201 277 aa13.75□□□□□ -0.21
CNOT3-209ENST00000617930 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms