RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 C1orf140Q5VVS0 124 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 C2orf91Q6ZV80 131 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 LHFPL1Q86WI0 220 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 OR5A1Q8NGJ0 315 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 OR2T10Q8NGZ9 312 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 TERB2Q8NHR7 220 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 TEX37Q96LM6 180 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 NAT8Q9UHE5 227 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 NAT8BQ9UHF3 227 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 RBM7Q9Y580 266 aaKnown RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 SCN8AQ9UQD0 1980 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 MYH7P12883 1935 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 OVOS2A0A0G2JMS6 1433 aa1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 MYO5AQ9Y4I1 1855 aaKnown RBP1.48□□□□□ -2.17
SCAMP1-205ENST00000614488 COL18A1P39060 1754 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 KIAA0586Q9BVV6 1533 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 ANAPC1Q9H1A4 1944 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 MEIKINA0A087WXM9 373 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 A0A087X0T9 212 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 LOC107984640A0A0U1RRK4 108 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 C17orf98A8MV24 154 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 MIF4GDA9UHW6 222 aaKnown RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 ATP6V1G2-DDX39BF2Z307 99 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 J3QQQ9 107 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 K7ERJ3 54 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 M0R2Z0 102 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 NAPSAO96009 420 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 IGHV3-7P01780 117 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 FABP2P12104 132 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 DEFA4P12838 97 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 EIF2B2P49770 351 aaKnown RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 RAB5CP51148 216 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 RRAS2P62070 204 aaPredicted RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 PLCXD2Q0VAA5 305 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 VMA21Q3ZAQ7 101 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 SPANXN3Q5MJ09 141 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 BCL2L15Q5TBC7 163 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 TMEM244Q5VVB8 128 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 Q5XG85 94 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 NOXRED1Q6NXP6 359 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 C4orf22Q6V702 233 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 IFT20Q8IY31 132 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 TCTE3Q8IZS6 198 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 TEX29Q8N6K0 151 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 CLDND2Q8NHS1 167 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 SMCR5Q8TEV8 140 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 FGF13Q92913 245 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 AP1S3Q96PC3 154 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 TP53RKQ96S44 253 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 C2orf88Q9BSF0 95 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 MND1Q9BWT6 205 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 MRPL32Q9BYC8 188 aaKnown RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 LPAR5Q9H1C0 372 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 TMEM133Q9H2Q1 129 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 SMDT1Q9H4I9 107 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 OSTCQ9NRP0 149 aa1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 ZFC3H1O60293 1989 aaKnown RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 ROCK2O75116 1388 aaKnown RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 IBTKQ9P2D0 1353 aaPredicted RBP1.47□□□□□ -2.17
SCAMP1-205ENST00000614488 WDR90Q96KV7 1748 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 WDR7Q9Y4E6 1490 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 A0A096LPI6 279 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 TRAV5A0A0B4J249 113 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 A0A1W2PQD3 144 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 IRGMA1A4Y4 181 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 GRIFINA4D1Z8 144 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 TMEM212A6NML5 194 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 GNG7O60262 68 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 CST7O76096 145 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 DPM2O94777 84 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 NPYP01303 97 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 C1QAP02745 245 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 PAEPP09466 180 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 SCTP09683 121 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 KDELR1P24390 212 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 RNASE4P34096 147 aaKnown RBP1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 SDC2P34741 201 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 RPL28P46779 137 aaKnown RBP1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 DYNLT3P51808 116 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 ARPP19P56211 112 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 YPEL3P61236 119 aaPredicted RBP1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 HIST1H4AP62805 103 aaKnown RBP1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 UBE2BP63146 152 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 ZNF117Q03924 483 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 AKR1C1Q04828 323 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MIAQ16674 131 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MORN2Q502X0 79 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MIR17HGQ75NE6 70 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 TRAPPC6BQ86SZ2 158 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MSRB3Q8IXL7 192 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 HIST3H2BBQ8N257 126 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 OR51A4Q8NGJ6 313 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 BRK1Q8WUW1 75 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 IMMP2LQ96T52 175 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 MIEN1Q9BRT3 115 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 GINS4Q9BRT9 223 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 RNF122Q9H9V4 155 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 XAGE1AQ9HD64 81 aa1.46□□□□□ -2.18
SCAMP1-205ENST00000614488 CALML5Q9NZT1 146 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms